AT1G08280.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.562 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycosyltransferase family 29 (sialyltransferase) family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glycosyltransferase family 29 (sialyltransferase) family protein; FUNCTIONS IN: sialyltransferase activity; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: endomembrane system, integral to Golgi membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Sialyltransferase (InterPro:IPR012163), Glycosyl transferase, family 29 (InterPro:IPR001675); Has 2035 Blast hits to 2021 proteins in 100 species: Archae - 0; Bacteria - 0; Metazoa - 1803; Fungi - 0; Plants - 152; Viruses - 18; Other Eukaryotes - 62 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:2608408..2609604 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45937.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.67 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 398 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKRSVRPLFS ALLFAFFAAT LICRVAIRRS SFSFASAIAE LGSSGLMTED IVFNETLLEF AAIDPGEPNF KQEVDLISDY DHTRRSHRRH FSSMSIRPSE 101: QQRRVSRDIA SSSKFPVTLR SSQAYRYWSE FKRNLRLWAR RRAYEPNIML DLIRLVKNPI DVHNGVVSIS SERYLSCAVV GNSGTLLNSQ YGDLIDKHEI 201: VIRLNNAKTE RFEKKVGSKT NISFINSNIL HQCGRRESCY CHPYGETVPI VMYICQPIHV LDYTLCKPSH RAPLLITDPR FDVMCARIVK YYSVKKFLEE 301: KKAKGFVDWS KDHEGSLFHY SSGMQAVMLA VGICEKVSVF GFGKLNSTKH HYHTNQKAEL KLHDYEAEYR LYRDLENSPR AIPFLPKEFK IPLVQVYH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)