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AT1G32930.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.450
endoplasmic reticulum 0.403
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Galactosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Galactosyltransferase family protein; FUNCTIONS IN: transferase activity, transferring hexosyl groups, transferase activity, transferring glycosyl groups; INVOLVED IN: protein amino acid glycosylation; LOCATED IN: membrane; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 31 (InterPro:IPR002659); BEST Arabidopsis thaliana protein match is: Galactosyltransferase family protein (TAIR:AT1G05170.1); Has 1058 Blast hits to 1054 proteins in 91 species: Archae - 0; Bacteria - 0; Metazoa - 501; Fungi - 0; Plants - 540; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Protein Annotations
CAZy:GT31EC:2.4.1.-eggNOG:ENOG410XV5HeggNOG:KOG2288
EMBL:AC006424EMBL:AK227878EMBL:BT006435EMBL:CP002684
EMBL:KJ138975EnsemblPlants:AT1G32930EnsemblPlants:AT1G32930.1entrez:840187
ExpressionAtlas:Q9MAP8GeneID:840187Genevisible:Q9MAP8GO:GO:0000139
GO:GO:0006486GO:GO:0008378GO:GO:0016021Gramene:AT1G32930.1
hmmpanther:PTHR11214hmmpanther:PTHR11214:SF106HOGENOM:HOG000238809InParanoid:Q9MAP8
InterPro:IPR002659InterPro:IPR025298KEGG:00051+2.4.1.-KEGG:00512+2.4.1.-
KEGG:00513+2.4.1.-KEGG:00514+2.4.1.-KEGG:00522+2.4.1.-KEGG:00533+2.4.1.-
KEGG:00540+2.4.1.-KEGG:00550+2.4.1.-KEGG:00561+2.4.1.-KEGG:00563+2.4.1.-
KEGG:00600+2.4.1.-KEGG:00601+2.4.1.-KEGG:00603+2.4.1.-KEGG:00604+2.4.1.-
KEGG:00906+2.4.1.-KEGG:00908+2.4.1.-KEGG:00941+2.4.1.-KEGG:00942+2.4.1.-
KEGG:00944+2.4.1.-KEGG:00945+2.4.1.-KEGG:00965+2.4.1.-KEGG:ath:AT1G32930
ncoils:CoilOMA:FFVMGIMPANTHER:PTHR11214PaxDb:Q9MAP8
Pfam:PF01762Pfam:PF13334Pfam:Q9MAP8PhylomeDB:Q9MAP8
PIR:H86453PRIDE:Q9MAP8PRO:PR:Q9MAP8ProteinModelPortal:Q9MAP8
Proteomes:UP000006548RefSeq:NP_174569.1STRING:3702.AT1G32930.1TAIR:AT1G32930
TMHMM:TMhelixUniGene:At.40035UniPathway:UPA00378UniProt:Q9MAP8
UniProt:W8Q3Q1
Coordinates (TAIR10) chr1:-:11931980..11934399
Molecular Weight (calculated) 44597.90 Da
IEP (calculated) 7.20
GRAVY (calculated) -0.35
Length 399 amino acids
Sequence (TAIR10)
(BLAST)
001: MGMGRYQKSA TSGVSARWVF VLCISSFLLG VLVVNRLLAS FETVDGIERA SPEQNDQSRS LNPLVDCESK EGDILSRVSH THDVIKTLDK TISSLEVELA
101: TARAARSDGR DGSPAVAKTV ADQSKIRPRM FFVMGIMTAF SSRKRRDSIR GTWLPKGDEL KRLETEKGII MRFVIGHSSS PGGVLDHTIE AEEEQHKDFF
201: RLNHIEGYHE LSSKTQIYFS SAVAKWDADF YIKVDDDVHV NLGMLGSTLA RHRSKPRVYI GCMKSGPVLA QKGVKYHEPE YWKFGEEGNK YFRHATGQIY
301: AISKDLATYI SVNRQLLHKY ANEDVSLGSW FIGLDVEHID DRSLCCGTPL DCEWKGQAGN PCAASFDWSC SGICKSVDRM LEVHQRCGEG DGAIWHSSF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)