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AT5G54670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:24134884 (2013): cytoskeleton microtubules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : kinesin 3
Curator
Summary (TAIR10)
Encodes a truncated KatC polypeptide (KatC(207-754)), which includes the carboxyl-terminal region of KatC. This was expressed in Escherichia coli and was shown to possess microtubule-stimulated ATPase activity.
Computational
Description (TAIR10)
kinesin 3 (ATK3); FUNCTIONS IN: microtubule binding, microtubule motor activity, ATPase activity; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: kinesin 2 (TAIR:AT4G27180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G54670-MONOMEReggNOG:COG5059eggNOG:KOG0239EMBL:AK228138
EnsemblPlants:AT5G54670EnsemblPlants:AT5G54670.1entrez:835556ExpressionAtlas:Q0WS04
Gene3D:3.40.850.10GeneID:835556GO:GO:0003777GO:GO:0005524
GO:GO:0005874GO:GO:0007018Gramene:AT5G54670.1hmmpanther:PTHR24115
hmmpanther:PTHR24115:SF520InterPro:IPR001752InterPro:IPR019821InterPro:IPR027417
InterPro:IPR027640KEGG:ath:AT5G54670KO:K10405ncoils:Coil
OMA:ECGGIEFPANTHER:PTHR24115PaxDb:Q0WS04Pfam:P46875
Pfam:PF00225Pfscan:PS50067PhylomeDB:Q0WS04PRIDE:Q0WS04
PRINTS:PR00380PROSITE:PS00411PROSITE:PS50067ProteinModelPortal:Q0WS04
RefSeq:NP_568811.1scanprosite:PS00411SMART:SM00129SMR:Q0WS04
STRING:3702.AT5G54670.1SUPFAM:SSF52540TAIR:AT5G54670tair10-symbols:ATK3
tair10-symbols:KATCUniGene:At.20653UniProt:P46875UniProt:Q0WS04
Coordinates (TAIR10) chr5:+:22209912..22213843
Molecular Weight (calculated) 85034.90 Da
IEP (calculated) 6.07
GRAVY (calculated) -0.61
Length 754 amino acids
Sequence (TAIR10)
(BLAST)
001: MVGAMANNGR IRSAFPVTNG SKDLTPNSAP ASTTGSEYGP VEFTREDVET LLNERIKYKS KFNYKERCEN MMDYIKRLRL CIRWFQELEL DYAFEQEKLK
101: NALELNEKHC VDMEVSLKNK EEELNMIIEE LRKNFESVQV QLAREQTEKL AANDSLGKEK EARLSVEKAQ AGLTEELGKA QGDLQTANQR IQSVNDMYKL
201: LQEYNSSLQL YNSKLQGDLD EAHETIKRGE KERTAIIENI GNLKGQFSAL QEQLAASKAS QEDIMKQKGE LVNEIASLKV ELQQVKDDRD RHLVEVKTLQ
301: TEATKYNDFK DAITELETTC SSQSTQIRQL QDRLVNSERR LQVSDLSTFE KMNEYEDQKQ SIIDLKSRVE EAELKLVEGE KLRKKLHNTI LELKGNIRVF
401: CRVRPLLPGE NNGDEGKTIS YPTSLEALGR GIDLMQNAQK HAFTFDKVFA PTASQEDVFT EISQLVQSAL DGYKVCIFAY GQTGSGKTYT MMGRPGNVEE
501: KGLIPRCLEQ IFETRQSLRS QGWKYELQVS MLEIYNETIR DLLSTNKEAV RTDSGVSPQK HAIKHDASGN THVAELTILD VKSSREVSFL LDHAARNRSV
601: GKTQMNEQSS RSHFVFTLRI SGVNESTEQQ VQGVLNLIDL AGSERLSKSG STGDRLKETQ AINKSLSSLG DVIFALAKKE DHVPFRNSKL TYLLQPCLGG
701: DAKTLMFVNI APESSSTGES LCSLRFAARV NACEIGTPRR QTNIKPLENR LSLG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)