AT3G05510.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.645 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Phospholipid/glycerol acyltransferase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Phospholipid/glycerol acyltransferase family protein; FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), Tafazzin (InterPro:IPR000872); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT1G78690.1); Has 2893 Blast hits to 2889 proteins in 878 species: Archae - 0; Bacteria - 2016; Metazoa - 247; Fungi - 124; Plants - 99; Viruses - 0; Other Eukaryotes - 407 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:1595576..1598074 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50346.90 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.55 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||
| Length | 448 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGIHFVDKAD LWKSALLFNL KLRDRFRIAV DDHRGRATVF SPDGCFSSTI HRWVTRFRNF RRESLPSPPA FYRRRVSKDL TAEEESALFR MLQTVAVPLI 101: GNACHVFMNG FNRVQVYGLE KLHDALLNRP KNKPLVTVSN HVASVDDPFV IASLLPPKFL LDARNLRWTL CATDRCFKNP VTSAFSRSVK VLPISRGEGI 201: YQQGMDIAIS KLNNGGWVHI FPEGSRSRDG GKTMGSAKRG IGRLILDADT LPMVVPFVHT GMQDIMPVGA SVPRIGKTVT VIIGDPIHFN DILSTEGAQH 301: VSRKHLYDAV SSRIGQRLYD LKAQVDRVYI EQQSMMSHNA KTPSDRAAEI FHRVDWDSFG MGAQFSEESS PSSKPIGQSD DRIVRSPKRR VSPEGGVSLK 401: IKKLMDSTEM MGFAARGLLM NEYKSRVESA NVGRPLKAWR EYFMNRGL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)