AT5G64150.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.921 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : RNA methyltransferase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
RNA methyltransferase family protein; FUNCTIONS IN: protein methyltransferase activity, methyltransferase activity, catalytic activity, nucleic acid binding; INVOLVED IN: methylation, protein amino acid methylation; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase small (InterPro:IPR007848), DNA methylase, N-6 adenine-specific, conserved site (InterPro:IPR002052), Modification methylase HemK (InterPro:IPR004556); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:25668997..25670731 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42175.60 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.49 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.22 | ||||||||||||||||||||||||||||||||||||||||
| Length | 377 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIRIFPSLRL TSLLSAAKPL CSSSPAKKPP QYTSLTESKS SRPTKSLSIT PKTPLYLRTP SHATSLSEVW KWHDWAKDLA SSVEESSKNS EDTLDSVILH 101: RELKWLIEDS IVDDPLVILH RSEIADNGEK NVKLRASLEE LYDLWRQRIE KRRPFQYVVG CEHWRDLVLC VEEGVLIPRP ETELIVDMVE ELVTRDEWFK 201: KDIWADLGTG SGAIAIGIAK VLGSRGRVIA TDLSPVAIAV AGHNVQRYSL EGMIEVREGS WFEPLKDLEG KLVGLVSNPP YIPSDDIPGL QAEVGRHEPK 301: LALDGGIDGT DSLFHLCHGA SRMLQPGGFF VFETNGEKQS KMIVDYMMTS DLKDCFSDLK IVSDFAGINR FVTGFRL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)