AT5G65440.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.986 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G24610.1). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:26152015..26156896 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 126766.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.86 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||
| Length | 1125 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MFREAGLRNI GEDVDSRWTI GNRKLDAKSV PNANSGHGFG FRSAPPLSSS IKPVRGNNNG GSSSDMDIAS DSDEEIFERQ HSPQDYRIHL GLPHVAAQNG 0101: LGRNGAKVFG AADDLSDSAT STEVSYEAEA CGVRNNISSH NEFERRNVEA GTSGRTLNGT STSTSSLPRF PTFHASEQGP WSAMIAYEAC VRLCLHSWST 0201: DSVSEASYFL NNECTIMRNA FSLQRFFLHS EEELLGKGPS ELVTETSVPK SKKTIGKIKL QVRRIKMGLD PPPGCNIATL TVSKEKLEVV RHHIVELNST 0301: LSSGWKAARK VHVTPQVPLN GSLSRQSLAY MQAAARYLKQ VSKAVKKEIV TSHTGPQTYE AVQETYSCSL RLKSSPEDDQ IKTQPGSGET FIFLPDSLGD 0401: DLIIEVRDSK AQLLGRVVAQ LAAMADDPVR FSLSHSHYVF RLLIPLDAEA EDLMFFLFFL NQSEKLRWLP IYHEPEHELI GRIQLTFSYS SSLDEKTKCG 0501: LVAETSAYDL VLEVAMKAER FQRRNLLFKG PWHWMITRFA SYYGVSDAYT RLRYLSYVMD VASPTKDCLD LIHDFLFPII MTSNHRAVLS HQENRLLGEI 0601: DEQIQQILAS AFENYKSLAE LSFSGMKDVF ESATGTPAPA IESAVKLYGL LNDVLTPEAQ LKLCRYFQAA SKKRSRRHLL DTNDLLNNRS EGVPVDPMVL 0701: AASYQKMKSL ILSLKNEIST DIAIHDCNVL PSFIDLPNHS AAIYSVDVCN RLREFLLVWP PPGPSPAVVD LVITTADFQR DLSSWHINPI KGGVNAKELF 0801: YSYITTWIEE KRRVLYELCK LETSKACVEI PGLTSPFVDE MYERLNGTLD EYDIIIRRWP EYAISLEKVV ADSEKAIVEA MEKQFTEILS PLKESKIFGL 0901: KIVKKFTKGT PNPYSVPKEL GVLLNSMKRV LDILRPSIEN RFKSWNSYIP DGENRVLGER LSEVTVLLRS KFRSYMQALV EKLAENTRIQ SHMKLKTIIH 1001: DLRETTAEPD VRNRMTSLKD LLDKTIDHLH GVFLPDVFVA ICRGIWDRMG QDVLRLLEDR KDNVTWHKGP RIAVSVLDEI FATQMQSLLG NGLKPEHLEP 1101: PRSMMELRSM LCKDSTDYRE GGYNY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)