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AT3G05910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Pectinacetylesterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Pectinacetylesterase family protein; FUNCTIONS IN: carboxylesterase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pectinacetylesterase (InterPro:IPR004963); BEST Arabidopsis thaliana protein match is: Pectinacetylesterase family protein (TAIR:AT5G26670.1); Has 545 Blast hits to 537 proteins in 93 species: Archae - 0; Bacteria - 42; Metazoa - 117; Fungi - 0; Plants - 302; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink).
Protein Annotations
EC:3.1.1.-eggNOG:ENOG410XQKDeggNOG:KOG4287EMBL:AC012393
EMBL:AC013454EMBL:AF428303EMBL:AY050847EMBL:AY096751
EMBL:CP002686EnsemblPlants:AT3G05910EnsemblPlants:AT3G05910.1entrez:819760
ESTHER:arath-Q9SFF6ExpressionAtlas:Q9SFF6GeneID:819760Genevisible:Q9SFF6
GO:GO:0005576GO:GO:0005618GO:GO:0016787GO:GO:0071555
hmmpanther:PTHR21562hmmpanther:PTHR21562:SF5HOGENOM:HOG000238558InterPro:IPR004963
iPTMnet:Q9SFF6OMA:AGMFLDTPANTHER:PTHR21562PaxDb:Q9SFF6
Pfam:PF03283Pfam:Q9SFF6PhylomeDB:Q9SFF6PRIDE:Q9SFF6
PRO:PR:Q9SFF6ProteinModelPortal:Q9SFF6Proteomes:UP000006548RefSeq:NP_566263.1
SMR:Q9SFF6STRING:3702.AT3G05910.1TAIR:AT3G05910UniGene:At.10321
UniProt:Q9SFF6
Coordinates (TAIR10) chr3:-:1764509..1767240
Molecular Weight (calculated) 46329.30 Da
IEP (calculated) 8.13
GRAVY (calculated) -0.22
Length 415 amino acids
Sequence (TAIR10)
(BLAST)
001: MVKLLLVGFV VAGIILGTQA NEYLDFNVTE IDRIEELEFG FSKYSSNLNP LMVGLTLIRG ADSGAVCLDG TLPGYHLHRG HGSGANSWLI QLEGGGWCNN
101: IRTCVYRKTT RRGSSNYMEK QLQFTGILSD KAQENPDFFN WNRVKLRYCD GASFSGDGQN QAAQLQFRGE RIWRAAIDDL KANGMRYANQ ALLSGCSAGG
201: LAAILRCDEF RNLFPGSTKV KCLSDAGLFL DTADVSGGRT IRNLYNGVVE LQSVKNNLPR ICTNHLDPTS CFFPQNLISQ MKTPLFIVNA AYDTWQIQSS
301: IAPTSADPSG FWHDCRLNHG KCTPAQLRFL QGFREQMLRV VKGFSMSRQN GLFINSCFAH CQTERQDTWF ADDSPVIRKK AVAIAVGDWY FDRAEVKLVD
401: CPYPCDKSCH NLVFR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)