AT5G61560.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.536 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : U-box domain-containing protein kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
U-box domain-containing protein kinase family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, protein ubiquitination, response to stress; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Protein kinase, ATP binding site (InterPro:IPR017441), U box domain (InterPro:IPR003613), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: U-box domain-containing protein kinase family protein (TAIR:AT4G25160.1). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24753476..24756506 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 90069.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.76 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.56 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 794 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGDGALIVAV AIKGNNSKTK GVVRWALQEF ASQEHVVFKL LHVQPRDSNS VSTTRKDLTT SVYKKDVDRK TREMLLPSRD MFVHREVQLD IMVLESDDIA 101: DAISKAVQDH GISELVIGAS SSIIFSWKLK RSNLSSRIAD ATPRFCSVHV ISKGKLLNVR KSDMDTETSI ADDRSESRFS SDSHSVSSTS SHQFSSTPLL 201: FQRIQALTTV NQKVGTNIGK QNNEPHHHHH NRAGSLDVDE SKLLNQKGFY RTSSSGIGYG GSDISSWRSS QMEEASSSST YSDPTSSSSQ IHKDFELEKL 301: KIELRHIKGM YAVAQSEVID ASKKMQDLNQ RRSEEATRLK NLTIREEEAD EVVEMERERQ EDAENEAELV RECIERETEE RLEAEARAEE VRKEKQRLED 401: ALEGGPLQRQ QYMKFEWEEI VEATSSFSDE LKIGVGGYGS VYRCNLHHTT VAVKVLHSDK SSLTKQFHQE LEILSKIRHP HLLLLLGACP ERGSLVYEYM 501: HNGSLEERLM KRRPNVDTPQ PPPLRWFERF RIAWEIASAL YFLHTNEPRP IVHRDLKPAN ILLDRNNVSK IGDVGLSKMV NLDPSHASTV FNETGPVGTF 601: FYIDPEYQRT GVVTPESDIY AFGIILLQLV TARSAMGLAH SIEKALRDQT GKFTEILDKT AGDWPVKEAK EMVMIGLRCA EMRKRDRPDL GKEILPVLER 701: LKEVASIARN MFADNLIDHH HNAPTHFYCP ITKDVMENPC VASDGYTYEK RAIKEWLQKN HKSPMTDLPF PSDSLLPNHS LLSAIKEWRS QLIK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)