AT5G13950.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:4496196..4500206 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 106686.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.90 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.79 | ||||||||||||||||||||||||||||
| Length | 954 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAADQRRKRM NSANVIGTSS REHYRAKRKK NASPDGALRS GDHITLEWDR NRSKVVSKKE QVGLSFRHLR EFVDVVPPRR NVLAQVCPVP HETFQLENLS 101: EVLSNEVWRS CLSDGERNYL RQFLPEGVDV EQVVQALLDG ENFHFGNPSL DWGTAVCSGK AHPDQIVSRE ECLRADKRRY YSNLEKYHQD IIDYLQTLKE 201: KWESCKDPEK DIVKMMWGSV LYNFLFKRRT VEVRSRGGNA QVNGSCQGLT AASGSSSWNE DDKPDSSDNM ISPVVRCGEV QRRSKRSGLE KEKTQNNGVN 301: VGGKVRKKNV LPKDSIQQTD GAKYMSYLKI SKKQHQIVTS MKQSGKSIQS RALNRIFGNI DSLDVQPYGV FVEEEQKKLN AHWLHLVKDL PAAYAIWKRL 401: QLQKRDIISS MGRELKEKCN LWMEDKQQQY AAENPLQKHD VQYNNGESLN PNQSGDMAPD GEDSGIFSQI SGKNHSPSKD SSSYGDQITD SGRCLLVGTH 501: SSQVSSPDCG NNINHEDREE KQYSSPCSPS RCHSFNRTDV EVNNYSSSIQ GQSLPQASFP NEPHASDLED ADHVGKHCAP ELENASLDER IPCIATSLGE 601: GSQFCSGGDV WQPVGGIRQS YISRQAYTPS GGLSIIHHPE GDEVAKNCFI DLESNMPEEV DRRKMLQRNA NNSFGSFPNN NQNEILQSLF NGQGMVSRTT 701: EQLHPLLKVP LNEEHKQIMG IGFQQEGNNN MMVGNQFSGQ FQDQIPASHA FPQDQQRQVD AFGQGSMSDN IYRGFLMQRP DWNPNCTQIG VTAQPLLSTG 801: PLLNQNWQFR SMWANTNGVG CTSQGSQTGT ERDPSLLRVA NNAEQIIHRG SSSDQSLFSV LSQCSQLRPS RSAFEPESSS HQMVASGNYG MLMGGGSTQV 901: SSNLVQPANP LDYLSGSNPT TSLMPDDVVW MNQSRQNSGL HDPLGKLYPR SWNP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)