AT3G20720.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7240098..7246754 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 130957.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.12 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||
| Length | 1199 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MESILARALE YTLKYWLKSF TRDQFKLQGR TAQLSNLDIN GEAIHASMGL PPALSVTTAK VGKLEIMLPY VSNVQTEPIV VQIDKLDLVL EENPDADVTK 0101: GPSSSQSPTA SAKSNGYGFA DKIADGMTLQ VKVVNLLLET GGGANREGGA AWAAPLASIT IRNLVLYTTN ESWKVVNLKE ARDFSTNTGF IYLFKKLEWE 0201: ALSIDLLPHP DMFTEANLAR SEEANLRDED GAKRVFFGGE RFLEGISGQA YITVQRTALN SPLGLEVQLH IPEAVCPALS EPGLRALLRF LTGMYLCLNR 0301: GDVDPKSQQS AEAAGRSLVS VLVDHVFLCI KDAEFQLELL MQSLLFSRAC VSDGESANYL TKILIGGLFL RDAFSRSPCA LIQPSMKAAA EDLAIPDFAK 0401: NFCPLIYPLD SGPWQIVQDV PLISLHSLQV KPSPKPPHFF SKTVIQCQPL MVHLQEEACL RISSFLADGI VVNPGDVLPD NSVNSLLFTL KELDVSVPLD 0501: MSNLQDSAIE EDLSVKKSFV GARLHIENLS FAESPTLKVR LLNLEKDPAC FCLWPGQPID ASQKKWTAGA SHFSLALETS PNSTQLQSPR GPEMGLWNCV 0601: EGKDVSIEVA MVSADGKPLI TIPPPGGIVR IGVACEQYIS RASVEQLFFV LDLYSYFGKV SEKISIVKES KRQNTVSLTG GLLEKVPSDT AVKLALKDLQ 0701: LKFLESSFTS TQDMPLVQFL GKDLSVKVTH RTLGGAIAVS SNIYWENIEV DCVDTDVEHE HENSWNGHLV SCNGSTPLRR VFWVVNGRHD EHSGSTLTPF 0801: LDISITHVIP LSEKDMECHS VSIVACISGV RLGGGMSYAE ALLHRFGILN HDGGPGEGLS RGLDHLSSGP MSKLFKASIV DDRKKDGTPG NWNGDGFPHL 0901: GRPDDIDVSV ELRDWLFALE GREGVGTRIL NNEDIGREER CWHTNFRTFR VIAKSTPKNV DSNGTENQCD AHKYPVDSII VSVEGLQTVK PQMQKGTDSC 1001: NGLSTNGVHE NGQMHGGVNI EANIVASEDK SVHDDLLNWV AESLKFSVKQ PVEAVVTKDE LQHLTFLCKS EIDAMGRIVA GVLRVLKLEE SIGQATLNQL 1101: SNLGSEGFDK MFSPKASRAG SPKSSPFAAS LDSMREISLR ANLESTISSI EEASMELEAK CSALVSDLND SESSAKHANE LKQKLESLQS LMAKLRTQI |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)