AT3G14172.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:4698860..4704773 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 140035.00 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.34 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.96 | ||||||||||||||||||||||||
| Length | 1262 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MRPAIPLDYA VFQLSPKRSR CELFVSTTGN TEKLASGLVK PFVAHLKVAE EQVSREVQSI RLEVESNKNA GTWFVRFVST PEVLELVSAL DVEMSQLEAA 0101: RKIYGEGTSD QRSSAKDSTD TTPAADVTKK ELLKAIDLRL AAVRQDLATA CNRASAAGFN PITVSELSQF ADRFGANRLN EACTKFITLC QRRPELMSSW 0201: RVNQEEEAIR SSWESDMSID DPSEDPSRDL ATNRNQQHRE YQTGMEEQSA TGTSYCQHES KLKPQSSHDE NDEEEEKSTV QNEPLVSQPR QLTRRLSVQE 0301: RISMFENKQK ENSGEKTAVA KSTELKRLSS DLSSSAGMEK VVVRRWSGAS DMSIDLGNDR KDDTGDSPLC TPSSSSVSKD GSGASSKQFV GYNKKEQNGL 0401: SHAANPHRNE EECTSNNGGD WGMDEVESQN SSSTFLPKDK EVDLNVPFRT NNQVRHQGNS PDRYLEKNSK YKFHEKNPRA SSDYTGNANI NDDANNQMSD 0501: FISNRQNQIQ FRDPQSHSLS TLQQLGGTEP IITSVQSNGV TAESPRKELM PSDRQSPLLE DRQRKTPFSG GSEQMKRPHS RRPEMGSAAV NTKPSAAINS 0601: VSDISESDTL IQVSPTEQVQ RARPSKGSQE LNDELKVKAN ELEKLFAEHM LRVPGDQSSS VRRGKPGKPS EQAVTSQLRR PVAQDLSSVQ ISDQKTLAMP 0701: TLTSNDEDKF KTPPTMKMVV TKDYGDTTRQ NFPEISFSDN SRGKFYEQYM QKRDAKLKED WSCRRTEKEA KLKVMQDILD RSNAEMKTKF SQSTGRRDSS 0801: ARRAEKLVYF NSKLSAKKDQ HPISSFQSEE DEDGSRSTQN KKLQQNKNNL LIARTTATSA SRSAAKVSTL SAVRRRGQSE KHFAQSVPNF SEIKKEGMKP 0901: ASGVGKNGVR TQVRSSIRPK AVNEEEKLRR PKIFRKGAAE AAELATDFSQ LKSEDGVSVP LYLEQEQSGR NFNSHGTGIS SDNAQLKASE ESEASDDMEK 1001: EGMGEALDDT EVEAFTDAEN EMPRLSQESE EWGSTGVANG ESFSQLDAGS NTELPAAMAS RHQTMGSILD SPGESTSPWN SRVKHRYPNE ASELDASVDS 1101: PVGSPAFWNF SSLNHTESDT TQMRKKWGAA QKRAAGGNPS QNQCQQDVTK GLKRLLNFGR KNRAAESLAD WISATTSEGD DDTDDGRDLA NRSSEDLRKS 1201: RMGFLQSHPS GDSFNESELF TEHVQTTGTP LSFKLKEDQT TGASVKAPRS FFSLSNFRSK GK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)