AT3G59100.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glucan synthase-like 11 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a protein similar to callose synthase | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
glucan synthase-like 11 (GSL11); FUNCTIONS IN: transferase activity, transferring glycosyl groups, 1,3-beta-glucan synthase activity; INVOLVED IN: 1,3-beta-glucan biosynthetic process; LOCATED IN: 1,3-beta-glucan synthase complex, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 48 (InterPro:IPR003440), Protein of unknown function DUF605 (InterPro:IPR006745); BEST Arabidopsis thaliana protein match is: glucan synthase-like 7 (TAIR:AT1G06490.1); Has 1407 Blast hits to 1030 proteins in 176 species: Archae - 0; Bacteria - 2; Metazoa - 68; Fungi - 732; Plants - 523; Viruses - 0; Other Eukaryotes - 82 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:21843407..21853860 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 223526.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.94 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1921 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEASSSGTAE LPRSLSRRAP SRATTMMIDR PNEDASAMDS ELVPSSLASI APILRVANEI EKDNPRVAYL CRFHAFEKAH RMDATSSGRG VRQFKTYLLH 0101: RLEKEEEETK PQLAKNDPRE IQAYYQNFYE KYIKEGETSR KPEEMARLYQ IASVLYDVLK TVVPSPKVDY ETRRYAEEVE RKRDRYEHYN ILPLYAVGTK 0201: PAIVELPEVK AAFSAVRNVR NLPRRRIHLP SNTPNEMRKA RTKLNDILEW LASEFGFQRG NVANQREHII LLLANADIRK RNDEEYDELK PSTVTELMDK 0301: TFKSYYSWCK YLHSTSNLKF PDDCDKQQLQ LIYISLYLLI WGEASNVRFM PECICYIFHN MANDVYGILF SNVEAVSGET YETEEVIDEE SFLRTVITPI 0401: YQVIRNEAKR NKGGTASHSQ WRNYDDLNEY FWSKKCFKIG WPLDLKADFF LNSDEITPQD ERLNQVTYGK SKPKTNFVEV RTFWNLFRDF DRMWIFLVMA 0501: FQAMVIVGWH GSGSLGDIFD KDVFKTVLTI FITSAYLTLL QAALDIILNF NAWKNFKFSQ ILRYLLKFAV AFMWAVLLPI AYSKSVQRPT GVVKFFSTWT 0601: GDWKDQSFYT YAVSFYVLPN ILAALLFLVP PFRRAMECSD MRPIKVIMWW AQPKLYVGRG MHEDMFSLFK YTTFWIMLLI SKLAFNYYVE ILPLITPTKM 0701: IMNLHIGHYQ WHEFFPHATN NIGVVIAIWA PIVLVYLMDT QIWYAIFSTL FGGIHGAFSH LGEIRTLGML RSRFESIPIA FSRTLMPSED AKRKHADDYV 0801: DQKNITNFSQ VWNEFIYSMR SEDKISDRDR DLLLVPSSSG DVSVIQWPPF LLASKIPIAV DMAKDFKGKE DAELFRKIKS DSYMYYAVIE SYETLKKIIY 0901: ALLEDEADRR VMNQVFLEVD MSMQQQRFIY EFRMSGLPLL SDKLEKFLSI LLSDYEDQGT YKSQLINVFQ DVIEIITQDL LVNGHEILER ARVHSPDIKN 1001: EKKEQRFEKI NIHLVRDRCW REKVIRLHLL LSVKESAINV PQNLEARRRI TFFANSLFMN MPSAPRIRDM LSFSVLTPYY KEDVLYSEED LNKENEDGIS 1101: ILFYLQKIYP DEWTNYLDRL KDPKLPEKDK SEFLREWVSY RGQTLARTVR GMMYYRQALE LQCYQEVAGE QAEFSVFRAM ASNDENQKAF LERARALADL 1201: KFTYVVSCQV YGNQKKSGDI HNRSCYTNIL QLMLKYPSLR VAYVDEREET ADAKSPKVFY SVLLKGGDKF DEEIYRIKLP GPPAEIGEGK PENQNHAIIF 1301: TRGEALQTID MNQDNYFEEA FKLRNVLEEF NKERVGRRKP TILGLREHIF TGSVSSLAWF MSNQESSFVT IGQRILANPL RVRFHYGHPD IFDRIFHITR 1401: GGVSKASKVI NLSEDIFGGF NSTLRGGYVT HHEYIQVGKG RDVGLNPISI FEAKVANGNG EQTLSRDVYR LGHRFDFYRM LSFYFTTIGF YFSSMLTVLT 1501: VYAFLYGRMY MVMSGLEKEI LRLASPNQLE ALEQALATQS IFQLGFLMVL PMVMEIGLEH GFRSAIVDFF IMQLQLASVF FTFQLGTKSH YYGRTILHGG 1601: SKYRPTGRGF VVFHAKFAEN YRLYSRSHFV KGLELLLLLV VYQIYGHSYR SSNLYLYITV SMWFMVGSWL FAPFIFNPSG FEWQKTVDDW TDWKRWLGDR 1701: GGIGIPVEKS WESWWNVEQE HLKHTSIRGR ILEITLALRF FIYQYGIVYQ LNISQRSKSF LVYGLSWVVL LTSLLVLKMV SMGRRRFGTD FQLMFRILKA 1801: LLFLGFLSVM TILFVVFKLT LTDLSASVLA FLPTGWAILL IGQVLRSPIK ALGVWDSVKE LGRAYENIMG LVIFAPIAVL SWFPIVSEFQ ARLLFNQAFS 1901: RGLQISMILA GRKDKATSSH K |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)