AT1G35220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.966 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 313 Blast hits to 185 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 200; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:12909293..12913916 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 111292.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.51 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||
| Length | 1005 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MQHTPVTIED QLISKAVREE CQWENLPKRL QSILGSKDEW HRRVTAHCIK KRLLWNTCFA CKVCKEGEYY EDMMRYLRKN LALFPYHLAE YVCRVMRISP 0101: FRYYCDMIFE VMRNEQPYDS IPNFSAADAF RLTGIGRNEF IDIMNKCRSK KIMWKLNKSI AKDFLPTLPV DFPIDPWWGV CLVNFTIEEF KKLSEDEMAT 0201: IDKICKEEAN AYFLFDPEVI KGLYQRGLVY FDVPVYQDDR FKVSKLEGFI SNREQSYEDP IEELLYAVFV VSNENSTVAE LASTLQADVT QLQAAASFVC 0301: RLGWAVKLID PSSVLHDKIG SPRAILSDDE DASRASISST YRSADGEEAQ HGDNLGTESS GSRSSHVRVA FIVDANITSY LMMGSVSPGL KSHAVTLYEA 0401: GKLGHTSIPD LCQDLSTLEG AKFEGELQEF ANHAFSLRCV LECLISGGVA TDAIVDTMGS GTLSNDEAVT LLADVNLPDN SGDSLTSQII EASMVSDAPQ 0501: EVPLSTEHVP ESTKHEAASS TPSVDTTALT ETFSSNLNLQ NEGKPIPVEG PDTGKGNKKR KKYRVDILRC ESLASLTPAT LDRLFSRDYD IVVSMIPLPL 0601: TTVLPGPSGP VHFGPPSHSS MTQWMKLVLY STVGIGPLSV ILMKGQCLRM LPAPLAGCEK AIIWSWDGSS VGGLGNKFEG NLVKGGILLH CLNCLLKCSA 0701: VLVQPLSKHD LDSSGRIVTL DIPLPLKNSD GSIPHFGDEL GLPLEENTKL NSLLTKLANN MELKTVGYIR LLKLFKAKDS LKHFSPDNDE KYEWVPLTVE 0801: FGFPLFSPKL CNNICKRIVS SQLLQADSLM EQHDAMQCIR KRLKDICALY QATGPAAKLL YQKEQAKEPT RTNKLMNYAS GRWNPLVDPS SPISGATSEF 0901: QRLKLANRQR CRTEVLSFDG SILRSYTLAP VYEAATRSID ENAPLSTTKS DSDEADSREV ILPGLNLLYD GSELHPFDIG ACLQARQPVA LIAEAAAASA 1001: SLAPK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)