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AT1G70410.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:12938931 (2003): plastid plastid envelope
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : beta carbonic anhydrase 4
Curator
Summary (TAIR10)
Encodes a putative beta-carbonic anhydrase betaCA4. Together with betaCA1 (At3g01500) regulates CO2-controlled stomatal movements in guard cells.
Computational
Description (TAIR10)
beta carbonic anhydrase 4 (BCA4); FUNCTIONS IN: carbonate dehydratase activity, zinc ion binding; INVOLVED IN: response to carbon dioxide, carbon utilization, regulation of stomatal movement; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Carbonic anhydrase, prokaryotic-like, conserved site (InterPro:IPR015892), Carbonic anhydrase (InterPro:IPR001765); BEST Arabidopsis thaliana protein match is: beta carbonic anhydrase 3 (TAIR:AT1G23730.1); Has 4978 Blast hits to 4963 proteins in 1494 species: Archae - 34; Bacteria - 3837; Metazoa - 59; Fungi - 209; Plants - 361; Viruses - 0; Other Eukaryotes - 478 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G70410-MONOMERBioCyc:ARA:GQT-2220-MONOMERBioCyc:ARA:GQT-2221-MONOMERBioGrid:28597EC:4.2.1.1eggNOG:COG0288eggNOG:KOG1578
EMBL:AC003671EMBL:AK221439EMBL:AY034926EMBL:AY087827EMBL:AY113922EMBL:CP002684EnsemblPlants:AT1G70410
EnsemblPlants:AT1G70410.1EnsemblPlants:AT1G70410.2EnsemblPlants:AT1G70410.3entrez:843377ExpressionAtlas:Q94CE4Gene3D:3.40.1050.10GeneID:843377
Genevisible:Q94CE4GO:GO:0004089GO:GO:0005886GO:GO:0008270GO:GO:0009941GO:GO:0010037GO:GO:0010119
GO:GO:0015976GO:GO:2000122gramene_pathway:4.2.1.1gramene_pathway:CYANCAT-PWYhmmpanther:PTHR11002hmmpanther:PTHR11002:SF15HOGENOM:HOG000125183
InParanoid:Q94CE4IntAct:Q94CE4InterPro:IPR001765InterPro:IPR015892iPTMnet:Q94CE4KEGG:00910+4.2.1.1KEGG:ath:AT1G70410
KO:K01673ncoils:CoilOMA:VARIIVMPANTHER:PTHR11002PaxDb:Q94CE4Pfam:PF00484PhylomeDB:Q94CE4
PIR:T01481PRIDE:Q94CE4PRO:PR:Q94CE4PROSITE:PS00704PROSITE:PS00705ProteinModelPortal:Q94CE4Proteomes:UP000006548
RefSeq:NP_177198.1RefSeq:NP_849872.1RefSeq:NP_974119.1scanprosite:PS00704scanprosite:PS00705SMART:SM00947SMR:Q94CE4
STRING:3702.AT1G70410.2SUPFAM:SSF53056TAIR:AT1G70410tair10-symbols:ATBCA4tair10-symbols:BCA4tair10-symbols:CA4UniGene:At.10650
UniProt:O64595UniProt:Q56Y84
Coordinates (TAIR10) chr1:-:26534167..26536505
Molecular Weight (calculated) 28413.90 Da
IEP (calculated) 7.15
GRAVY (calculated) -0.18
Length 258 amino acids
Sequence (TAIR10)
(BLAST)
001: MATESYEAAI KGLNDLLSTK ADLGNVAAAK IKALTAELKE LDSSNSDAIE RIKTGFTQFK TEKYLKNSTL FNHLAKTQTP KFLVFACSDS RVCPSHILNF
101: QPGEAFVVRN IANMVPPFDQ KRHSGVGAAV EYAVVHLKVE NILVIGHSCC GGIKGLMSIE DDAAPTQSDF IENWVKIGAS ARNKIKEEHK DLSYDDQCNK
201: CEKEAVNVSL GNLLSYPFVR AEVVKNTLAI RGGHYNFVKG TFDLWELDFK TTPAFAFS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)