AT1G65470.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : chromatin assembly factor-1 (FASCIATA1) (FAS1) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Chromatin Assembly Factor-1 (CAF-1) p150 subunit. Mutants have reduced heterochromatin content. In Arabidopsis, the three CAF-1 subunits are encoded by FAS1, FAS2 and, most likely, MSI1, respectively. Mutations in FAS1 or FAS2 lead to increased frequency of homologous recombination and T-DNA integration in Arabidopsis. | ||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
FASCIATA 1 (FAS1); FUNCTIONS IN: histone binding; INVOLVED IN: in 11 processes; LOCATED IN: chromatin assembly complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromatin assembly factor 1 subunit A (InterPro:IPR022043). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24319906..24323879 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 92385.10 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.21 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.92 | ||||||||||||||||||||||||||||
| Length | 807 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDEVSTVNEN ENRKTMIEPK KLNKRKREPT AIENLTSEEK ESQISSLNLE MKGLFDYFRE VMDKSKRTDL FSGFSECSSL NSMVALLMEE MSLPLSKLVD 101: EIYLKLKEKT ESVTMVAVKS AVVSVGQRVS YGVLNVDADV LEDDSESCLW CWETRDLKIM PSSVRGVLKL RRTCRKKIHE RITAVSAMLA ALQREETEKL 201: WRSDLSKAAE KLGKILSEVD IRSFMDNMMQ KNSSEMAEKD SKREEKLLLK QLEKNRCEAE KEKKRMERQE KEQKLLQKAI VDENNKEKEE TESRKRIKKQ 301: QDESEKEQKR REKEQAELKK QLQVQKQASI MERFLKKSKD SSLTQPKLPS SEVTAQELSC TKHENEIGKV VQAIDNAFST TCEATVDDIR REHFASWRQL 401: GHLLSSSKKH WGMRRQPKSE LFPKLKLSTN SGVTSDGEPN MEKQGDGCEE NNFDGRQCKP SSSNRKKSRR VKQLLQFDKS CRPGFYGIWP SQSQVVKPRR 501: PLQKDPELDY EVDSDEEWEE EEAGESLSDC EKDEDESLEE GCSKADDEDD SEDDFMVPDG YLSEDEGVQV DRMDIDPSEQ DANTTSSKQD QESPEFCALL 601: QQQKHLQNLT DHALKKTQPL IICNLTHEKV SLLAAKDLEG TQKVEQICLR ALMVRQFPWS SLIEISINDI QDEDQEASKF SCSQSTPPSN SKAKIIPDSD 701: LLTVVSTIQS CSQGINRVVE TLQQKFPDVP KTKLRQKVRE ISDFEDSRWQ VKKEVLTKLG LSPSPDKGGK RLPKTISTFF SKRCLPPSTK PQPAVEDAAE 801: RLENENA |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)