AT3G18730.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : tetratricopeptide repeat (TPR)-containing protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with an important role in cell division control and plant morphogenesis and may also play a role in genome maintenance. May be involved in mitosis through interaction with TSA1. In cells synchronized for cell division, TSA1 and TSK relocalize to ends of spindle microtubules that are ahead of separating chromatids during metaphase and anaphase of mitosis. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
TONSOKU (TSK); FUNCTIONS IN: protein binding; INVOLVED IN: G2/M transition of mitotic cell cycle, meristem structural organization, regulation of meristem structural organization, cell division; LOCATED IN: nucleus, membrane; EXPRESSED IN: leaf; CONTAINS InterPro DOMAIN/s: Tetratricopeptide-like helical (InterPro:IPR011990), Tetratricopeptide repeat (InterPro:IPR019734); Has 6425 Blast hits to 3886 proteins in 382 species: Archae - 66; Bacteria - 1534; Metazoa - 3543; Fungi - 23; Plants - 266; Viruses - 0; Other Eukaryotes - 993 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:6446062..6453045 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 146490.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.38 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1311 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MGRLDVAAAK RAYRKAEEVG DRREQARWAN NVGDILKNHG EYVDALKWFR IDYDISVKYL PGKDLLPTCQ SLGEIYLRLE NFEEALIYQK KHLQLAEEAN 0101: DTVEKQRACT QLGRTYHEMF LKSEDDCEAI QSAKKYFKKA MELAQILKEK PPPGESSGFL EEYINAHNNI GMLDLDLDNP EAARTILKKG LQICDEEEVR 0201: EYDAARSRLH HNLGNVFMAL RSWDEAKKHI EMDINICHKI NHVQGEAKGY INLAELHNKT QKYIDALLCY GKASSLAKSM QDESALVEQI EHNTKIVKKS 0301: MKVMEELREE ELMLKKLSAE MTDAKGTSEE RKSMLQVNAC LGSLIDKSSM VFAWLKHLQY SKRKKKISDE LCDKEKLSDA FMIVGESYQN LRNFRKSLKW 0401: FIRSYEGHEA IGNLEGQALA KINIGNGLDC IGEWTGALQA YEEGYRIALK ANLPSIQLSA LEDIHYIHMM RFGNAQKASE LKETIQNLKE SEHAEKAECS 0501: TQDECSETDS EGHANVSNDR PNACSSPQTP NSLRSERLAD LDEANDDVPL ISFLQPGKRL FKRKQVSGKQ DADTDQTKKD FSVVADSQQT VAGRKRIRVI 0601: LSDDESETEY ELGCPKDSSH KVLRQNEEVS EESMYFDGAI NYTDNRAIQD NVEEGSCSYT PLHPIKVAPN VSNCRSLSNN IAVETTGRRK KGSQCDVGDS 0701: NGTSCKTGAA LVNFHAYSKT EDRKIKIEIE NEHIALDSCS HDDESVKVEL TCLYYLQLPD DEKSKGLLPI IHHLEYGGRV LKPLELYAIL RDSSENVVIE 0801: ASVDGWVHKR LMKLYMDCCQ SLSEKPSMKL LKKLYISEVE DDINVSECEL QDISAAPLLC ALHVHNIAML DLSHNMLGNG TMEKLKQLFA SSSQMYGALT 0901: LDLHCNRFGP TALFQICECP VLFTRLEVLN VSRNRLTDAC GSYLSTIVKN CRALYSLNVE HCSLTSRTIQ KVANALDSKS GLSQLCIGYN NPVSGSSIQN 1001: LLAKLATLSS FAELSMNGIK LSSQVVDSLY ALVKTPSLSK LLVGSSGIGT DGAIKVTESL CYQKEETVKL DLSCCGLASS FFIKLNQDVT LTSSILEFNV 1101: GGNPITEEGI SALGELLRNP CSNIKVLILS KCHLKLAGLL CIIQALSDNK NLEELNLSDN AKIEDETVFG QPVKERSVMV EQEHGTCKSV TSMDKEQELC 1201: ETNMECDDLE VADSEDEQIE EGTATSSSLS LPRKNHIVKE LSTALSMANQ LKILDLSNNG FSVEALETLY MSWSSSSSRT GIAQRHVKEE TVHFYVEGKM 1301: CCGVKSCCRK D |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)