AT1G30470.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.967 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : SIT4 phosphatase-associated family protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
SIT4 phosphatase-associated family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: SIT4 phosphatase-associated protein (InterPro:IPR007587); BEST Arabidopsis thaliana protein match is: SIT4 phosphatase-associated family protein (TAIR:AT3G45190.1). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:10779435..10786415 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 89030.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.16 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||
| Length | 805 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAGLSTASAV EAILDKDSFT LEDLLDEDEI IQECKALNGR LLNFLREKVQ VEQLIRYIIE EPLEDVEKKR TFKFPFIACE IFTCEIEMIL KTLVEDEELM 101: LLLFSFLEAK ETHNSLLAGY FSKVVICLLV RKTIPFMQFI KDHQEILKQL VDLIGITSIM EVLKRLVGTD EHLYSNYTSA MQWIEDTDVL EMIVDKFGSS 201: ESPEVHANAA EILCTVARYA PPGLATKLSS PSCTGRLLKH TLEDSRPKSV LVNSLSVCIS LLDPKRFTLG TYHIYGRQLT HGSMVTNPET VEGMLGSLGD 301: LLMLLNVSSA EGVLLTTYGK LQPPLGKHRL KIVEFISVLL TVGSEAAEKE VIRLGAVKRV LDLFFEYPYN NFLHHHVENV ILSCMESKNS QLVDHLLSEC 401: NLIGSILEAE KDSTLTAGDS DKPTVPAEGK KPLRIGNIGH LTRISNKLLQ LANSNVEIQS HLQENSKWVD WQTDVLSKRN TLENVYSWAC GRPTSLHDRS 501: RDSDDDDYHD RDYDVAALAN NLSQAFRYGI YSNDDMDEAQ GSMERDDEDV YFDDESAEVV ISSLRLGDDQ ESDSLFTNSN WFAFDDDKAA NERSMTSAAS 601: PSPNADGDGE DDDDVVIGEA DEFNATAASS PPVDMETEDS TSKHPSENPS EPEPEKSPAW VEWRETSEST APPSSNPEET TILSNGDVQI EKEDNDDDDD 701: TDNKSAVKTP GVPGDETTEK LPDESGVEPT ENSPKASGIE PTESSPKASG AEVTGNLRDS DPAESHADAK SSEPESPHGT KETEVAAEAD TKETEEAVKE 801: PEKVV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)