AT5G18525.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.984 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases; FUNCTIONS IN: protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: CUL4 RING ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), Beige/BEACH (InterPro:IPR000409), Serine/threonine-protein kinase domain (InterPro:IPR002290), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), Tyrosine-protein kinase, active site (InterPro:IPR008266), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: WD-40 repeat family protein / beige-related (TAIR:AT2G45540.1); Has 6236 Blast hits to 5560 proteins in 402 species: Archae - 7; Bacteria - 1002; Metazoa - 1933; Fungi - 1317; Plants - 774; Viruses - 0; Other Eukaryotes - 1203 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:6146932..6153658 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 183409.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.54 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.18 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1639 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MRGEDSDLCF DCLDQRINSD FSDQIVFSYG VSDSPLPFGS SAVVKVSDSS EEFSASCSSC ESTSSQFILE YLRKDEHGCL AKYVDKFVVK DREGNSNDAV 0101: ESDECLDCST SGSQATEDDD TENITCGSVT CEHSGSFSCW RTVAALLPIA QIRKCSASEL QKLASSFHYE CPEDQILASL HRLIDGKSSG QATHSFLCLL 0201: LGLPLLEEKS KLRCLRHPNL SPVLGLLTSS DCLVSVLPKA PYTLENILYY SPSAIKSEWH RNFIIYQLLS ALAHLHGLKV SHGDIRPSNI LLSDSLWSWL 0301: TIYSKPDLGS VDANSSASRR RWCVEGCYSY GLYADLKISS HLDWQTHFDK WWKGELSNFE YLLVLNKLAG RRWGDHTFHP VMPWVIDFSK KPENDSDSGW 0401: RDLRKSKWRL AKGDEQLDFT YSTFEFPHHV SDECLSELAV CSYKARRLPL SVLRKAVRSV YEPNEYPSDM QRLYDWTPDE CIPEFYCDPR IFCSLHPSMS 0501: DLAVPPWASS PDEFIRLHRD ALESPHVSSL IHHWIDITFG YKMSGHAAIT AKNVMLSSSE PTVPRSVGRR QLFFRPHPVR LGFSREKEQS RNELEMHTFH 0601: GFGVDNKRSV ILLADEYLEE TEEASAFSDH ATHLCPKYHL RENLVESPLH VSYSENTKKV NTSLPGTSKN KGLSSRISLN YLLEHMEVRD EASTELQELL 0701: QWRQDFCTGN ISKDIAGDIF SIGCVLAELY LMKPLFNSVS LATYLEGGDL PELIKELPPP TQVIVEACIE QDWRRRPSAK SLLDSPYFSA TVRSAHLFAA 0801: PLQLLAKGQT RLCYAASFAK QGVLKVMGTF VAEMCAVYCL PLVTTPLSED ECELAYVLLK EFTKSLTPMA VQRLVLPSIQ KILLTTGYSH LKVSLLQDSF 0901: VRELWNQIGK RVYLEMIHPL VISNLYNSPD KISASAASVL LIGSSEELGA PVTVHQTILP LISYFGKGIC TDGIDVLVRI GRLLGVNFIV KQMLPLLEHV 1001: VCFCIDLSSM KKPEPVHSWC SLALSDCLIT LDGLVALISD ELLIHELTKG RLCLHVRVLM QKNLELRVLQ FAATSLMSIC QRIGQEMTAL HVLPQLKELF 1101: DEFAFSEKST DASDSLSWKI RTAEQKFHPE SPIKSRMDLV LLLYPSFASL LGMEKLRQGC PTWLLLEQYL LKHHNWKWEY TGRSSRYNME ARPVLKQGPA 1201: SKHTPKVLLN GSGRSVPQSQ GLRNSNHLKL HIHVPVEGQE AVLNPLVHEP WSWFPSPVTC WDGLDIGRFG NPKDENRWKI RASVLSSARA HHGALRSLVV 1301: SEDECTVFTS GIDPGFKGSV QKWELASLSC VSSYHAHEEV VNDIGILSST GKVASCDGTI HVWNSQTGKL ISLFSESPSD QDQASSDPSS KNNSNPCNRH 1401: ASHGLSSGIF DENLYTCMHY LEYMDQLIVG TGFGALRFID LARGQKLELW GGEAIESGFT SLVSALCSGG SQTKHGDGAS VSPSWIAAGF SSGQCRLFDL 1501: RENGFISSWR AHDGYVTKLV APESHLLVSS SLDKTLRIWD LRKSWTPQPF VVKGHNDGVS GFSIWGKDVI SISRNNIGIF SLAKSQDEEE QQQQRIIPQK 1601: LYMAEKGGRV KSDLSTICVL PFSRLFIVGA HDGHLRICC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)