AT3G61690.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : nucleotidyltransferases | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
nucleotidyltransferases; FUNCTIONS IN: nucleotidyltransferase activity; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Nucleotidyl transferase domain (InterPro:IPR002934); BEST Arabidopsis thaliana protein match is: PAP/OAS1 substrate-binding domain superfamily (TAIR:AT3G51620.2); Has 793 Blast hits to 566 proteins in 156 species: Archae - 0; Bacteria - 43; Metazoa - 182; Fungi - 92; Plants - 200; Viruses - 0; Other Eukaryotes - 276 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:22828349..22833477 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 144867.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.19 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.74 | ||||||||||||||||||||||||||||
| Length | 1303 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MGEHESWAAS PPSPSGLHPN GLLPGKAASV TRPLDAERWA KAEDRTAKLI ACIQPNPPSE DRRNAVASYV RRLIMECFPQ VQIFMFGSVP LKTYLPDGDI 0101: DLTAFSANQN LKDSWANLVR DMLEKEEKNE NAEFHVKEVQ YIQAEVKIIK CLVENIVVDI SFNQIGGLCT LCFLEEVDHY INQNHLFKRS IILIKAWCYY 0201: ESRILGAHHG LISTYALETL VLYIFYLFNN SFSGPLEVLY RFLEFFSKFD WQNFCLSLWG PVPVSSLPDV TAEPPRRDVG ELRVSEAFYR ACSRVYAVNI 0301: APQEIQGQPF VSKHFNVIDP LRENNNLGRS VSKGNFFRIR SAFTLGAKKL TRLLECPKEN LIHEVNQFFM NTWERHGSGR RPDAPGNDLW LSRLGDPEPY 0401: HQAENVSNSL NNKRNQNAIR LGGVHGARSM PSQQNNCGTE ITSRVTYQTQ KSRGNSYQPA QEVNSNQSAL NDKLQQTVKP ETLVNNFHGR HIFARTRSSP 0501: ELTETHGEAL LQSRRSRAAP DAGKRQTNST RVDSIRKKSL ESETLSSGVR YSADSSSVRH TPSPQSPDST ADMSSAVNSY YDEVGSVSVN EDFSVAGEQE 0601: EQDLVNSMTS VTGQGFNGHF PFPFNFSTGH LPFPITPSIL ASMGYGQRNM PGIVPSNLPF IEAPWSTNLQ FPQNFVSSPF THYFPSGAHP ISEKPSKTGS 0701: DDMGSSEVNV DESDNDLWHE PERGTHSFGL ENGGYGMHQA DDKHQSSFAE HSFVPSRRKN RLTRGDDLEN SHSPVRGSSQ IQSEERTVGS RSVSGASSVR 0801: SRTSSESSWD GSTTRGSKPA KDRRNRKVVS GAASTLYGKG KSVPEHSIQI DDDNREWIPV SSNEIIDRDL GPRPTVPSFQ VQRHQIHGHE LAQASGSEST 0901: VSLAPFILGH GMQQNEVDNS GYTFYPTGPP VPIVAMLPMY NYQAGGNATS DALASHHSVD EGVENHEPCK SFDSSRGLDQ SEIVVSSHST RMGSSAEQVE 1001: RKNDILNGDF ISHWQNLQYG RSCQNSQHPP VLYPAPVVVP PAYLQGRLPW DGPGRPLAYT NAVNQLMTYG PRLVPVAPVQ PVSTRPPNIY PRYANETPRY 1101: RSGTGTYFPN PKISPREQRP TSGMRRGNYG HDRTDHHSDR EGNWNAGSKT RGSGRNHNNR NQADNKPISR QDRSDRHWGS SYRHESSSYS AHHSQNGPIR 1201: SNTSQDASGN IAYGMYRLPP GMKQNSVTSS EGHNVPSVMM FYPYGHNNVY NSPSEHNEYG SLGPGGEAPH LNDEDQPRFR GAAASAHMSS PDDPSSPHFP 1301: RGK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)