AT4G15960.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: epoxide hydrolase activity, catalytic activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Epoxide hydrolase-like (InterPro:IPR000639), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G15955.3); Has 13367 Blast hits to 13327 proteins in 1535 species: Archae - 74; Bacteria - 9325; Metazoa - 500; Fungi - 482; Plants - 526; Viruses - 1; Other Eukaryotes - 2459 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:9045763..9047199 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43062.50 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.41 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.44 | ||||||||||||||||||||||||||||||||||||
| Length | 375 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MFFLCRKLSL SRFRHHFPLR LRRFLGENPN PTTHFSTLPD NQTKRPEKSR LDGVEHKTLK VNGINMHVAE KPGSGSGEDP IILFLHGFPE LWYTWRHQMV 101: ALSSLGYRTI APDLRGYGDT EAPEKVEDYT YLNVDGDVVA LIDAVTGGDK AVSVVGHDWG AMIAWQLCQY RPEKVKALVN MSVLFSPRNP VRVPVPTLRH 201: VFGDDYYVCR FQKAGEIETE FKKLGTENVL KEFLTYKTPG PLNLPKDKYF KRSENAASAL PLWLTQEDLD YYVTKYENKG FTGPINYYRN IDRNWELTAP 301: WTGAKIRVPV KFIIGDQDLT YNFPGAKEYI NGGGFKRDVP LLDETVVLKG LGHFLHEENP DVINQHIHNF FHKFL |
||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)