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AT4G14130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28611809 (2017): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : xyloglucan endotransglucosylase/hydrolase 15
Curator
Summary (TAIR10)
xyloglucan endotransglycosylase-related protein (XTR7)
Computational
Description (TAIR10)
xyloglucan endotransglucosylase/hydrolase 15 (XTH15); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, xyloglucan:xyloglucosyl transferase activity, hydrolase activity, hydrolyzing O-glycosyl compounds; INVOLVED IN: N-terminal protein myristoylation, carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, apoplast, cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 16 (TAIR:AT3G23730.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G14130-MONOMERCAZy:GH16EC:2.4.1.207EC:3.2.1.151
eggNOG:COG2273eggNOG:ENOG410IVQKEMBL:AL161538EMBL:AY045865
EMBL:AY087282EMBL:BT020422EMBL:CP002687EMBL:U43489
EMBL:Z97335EnsemblPlants:AT4G14130EnsemblPlants:AT4G14130.1entrez:827051
Gene3D:2.60.120.200GeneID:827051Genevisible:Q38911GO:GO:0005618
GO:GO:0010411GO:GO:0016762GO:GO:0033946GO:GO:0042546
GO:GO:0048046GO:GO:0071555Gramene:AT4G14130.1hmmpanther:PTHR31062
hmmpanther:PTHR31062:SF34HOGENOM:HOG000236368InParanoid:Q38911IntAct:Q38911
InterPro:IPR000757InterPro:IPR008263InterPro:IPR010713InterPro:IPR013320
InterPro:IPR016455KEGG:ath:AT4G14130KO:K08235OMA:AYASNFF
PaxDb:Q38911Pfam:PF00722Pfam:PF06955Pfam:Q38911
Pfscan:PS51762PhylomeDB:Q38911PIR:F71402PIRSF:PIRSF005604
PRIDE:Q38911PRO:PR:Q38911PROSITE:PS01034PROSITE:PS51762
ProteinModelPortal:Q38911Proteomes:UP000006548RefSeq:NP_193149.2scanprosite:PS01034
SMR:Q38911STRING:3702.AT4G14130.1SUPFAM:SSF49899TAIR:AT4G14130
tair10-symbols:XTH15tair10-symbols:XTR7TMHMM:TMhelixUniGene:At.25124
UniProt:Q38911
Coordinates (TAIR10) chr4:-:8137161..8138196
Molecular Weight (calculated) 32688.80 Da
IEP (calculated) 9.59
GRAVY (calculated) -0.33
Length 289 amino acids
Sequence (TAIR10)
(BLAST)
001: MGPSSSLTTI VATVLLVTLF GSAYASNFFD EFDLTWGDHR GKIFNGGNML SLSLDQVSGS GFKSKKEYLF GRIDMQLKLV AGNSAGTVTA YYLSSQGATH
101: DEIDFEFLGN ETGKPYVLHT NVFAQGKGDR EQQFYLWFDP TKNFHTYSIV WRPQHIIFLV DNLPIRVFNN AEKLGVPFPK SQPMRIYSSL WNADDWATRG
201: GLVKTDWSKA PFTAYYRGFN AAACTASSGC DPKFKSSFGD GKLQVATELN AYGRRRLRWV QKYFMIYNYC SDLKRFPRGF PPECKKSRV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)