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AT4G02440.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : F-box family protein
Curator
Summary (TAIR10)
EID1 is an F-box protein that functions as a negative regulator in phytochrome A (phyA)-specific light signalling. Expressed at all stages of plant development independently of light conditions, localizes to the nucleus, and forms nuclear speckles under continuous far-red light. Forms stable dimeric and trimeric complexes with several ASK proteins and Cullin1 in yeast and in planta.
Computational
Description (TAIR10)
EMPFINDLICHER IM DUNKELROTEN LICHT 1 (EID1); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: photoperiodism, flowering, red, far-red light phototransduction, leaf development, regulation of photomorphogenesis; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 91 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioGrid:13299eggNOG:ENOG410IJ4DeggNOG:ENOG410Y9MIEMBL:AF069298EMBL:AK229833EMBL:AL161494EMBL:AY085530
EMBL:BT002038EMBL:BT008731EMBL:CP002687EnsemblPlants:AT4G02440EnsemblPlants:AT4G02440.1entrez:828008GeneID:828008
Genevisible:Q8LEA8GO:GO:0004842GO:GO:0005634GO:GO:0009585GO:GO:0010099GO:GO:0048366GO:GO:0048573
Gramene:AT4G02440.1hmmpanther:PTHR31348hmmpanther:PTHR31348:SF4HOGENOM:HOG000030777InParanoid:Q8LEA8IntAct:Q8LEA8InterPro:IPR001810
KEGG:ath:AT4G02440OMA:DAAYDCSPaxDb:Q8LEA8Pfam:Q8LEA8PhylomeDB:Q8LEA8PIR:T01306PRIDE:Q8LEA8
PRO:PR:Q8LEA8ProteinModelPortal:Q8LEA8Proteomes:UP000006548RefSeq:NP_192153.1STRING:3702.AT4G02440.1SUPFAM:SSF81383TAIR:AT4G02440
tair10-symbols:EID1UniGene:At.3886UniGene:At.43977UniPathway:UPA00143UniProt:Q8LEA8
Coordinates (TAIR10) chr4:+:1072555..1073565
Molecular Weight (calculated) 37400.20 Da
IEP (calculated) 5.26
GRAVY (calculated) -0.28
Length 336 amino acids
Sequence (TAIR10)
(BLAST)
001: MAESVFSCIP EDVVFNIFFK LQDDPRNWAR LACVCTKFSS IVRNVCCKTQ CYSAIPTVIS DLLPLPPSAA ASASSSTAAD SSLTPPGGWA SLYKLAVCCP
101: GLFHAGILLE NSDFGLEREL GPDQNLDPKP TTTDLALNDE EVSKPVGSGL ETTSFWSLYD DLYTDTIPAP PPEDSIDDQE EEIETSEIRP GRDLPVRKRR
201: KICRSLGSHL ASGGWNLSRE QGNKLLASRF RGDCLYICNW PGCIHVEEKR NYMLFRGVFK DFKRSRVWRT INDGNRSKTS GLKCAFCLCD ETWDLHSSFC
301: LRRVFGFHDD GEPVVRAYVC ENGHVSGAWT ALPLYT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)