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AT3G50530.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : CDPK-related kinase
Curator
Summary (TAIR10)
CDPK-related kinase
Computational
Description (TAIR10)
CDPK-related kinase (CRK); FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation, N-terminal protein myristoylation; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CDPK-related kinase 1 (TAIR:AT2G41140.1); Has 116660 Blast hits to 114838 proteins in 3097 species: Archae - 168; Bacteria - 14539; Metazoa - 43431; Fungi - 12865; Plants - 24050; Viruses - 569; Other Eukaryotes - 21038 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1954-MONOMEREC:2.7.11.1eggNOG:ENOG410XRMJeggNOG:KOG0032EMBL:AF435446EMBL:AK228391EMBL:AL133363
EMBL:CP002686EMBL:Y09418EnsemblPlants:AT3G50530EnsemblPlants:AT3G50530.1entrez:824217Gene3D:1.10.238.10GeneID:824217
Genevisible:Q9SCS2GO:GO:0004674GO:GO:0005524GO:GO:0016020GO:GO:0046872hmmpanther:PTHR24349hmmpanther:PTHR24349:SF115
HOGENOM:HOG000233030InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009InterPro:IPR011992InterPro:IPR017441iPTMnet:Q9SCS2
KEGG:ath:AT3G50530KO:K00924OMA:ETSICLYPaxDb:Q9SCS2Pfam:PF00069Pfam:Q9SCS2Pfscan:PS50011
PhylomeDB:Q9SCS2PIR:T46084PRIDE:Q9SCS2PRO:PR:Q9SCS2PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q9SCS2Proteomes:UP000006548RefSeq:NP_001190048.1RefSeq:NP_190622.1scanprosite:PS00107scanprosite:PS00108SMART:SM00220
SMR:Q9SCS2STRING:3702.AT3G50530.2SUPFAM:SSF47473SUPFAM:SSF56112TAIR:AT3G50530tair10-symbols:CRKUniGene:At.21
UniProt:Q9SCS2
Coordinates (TAIR10) chr3:+:18753833..18756487
Molecular Weight (calculated) 66994.90 Da
IEP (calculated) 9.04
GRAVY (calculated) -0.37
Length 601 amino acids
Sequence (TAIR10)
(BLAST)
001: MGLCTSKPNS SNSDQTPARN SPLPASESVK PSSSSVNGED QCVTTTNNEG KKSPFFPFYS PSPAHYFFSK KTPARSPATN STNSTPKRFF KRPFPPPSPA
101: KHIRAVLARR HGSVKPNSSA IPEGSEAEGG GVGLDKSFGF SKSFASKYEL GDEVGRGHFG YTCAAKFKKG DNKGQQVAVK VIPKAKMTTA IAIEDVRREV
201: KILRALSGHN NLPHFYDAYE DHDNVYIVME LCEGGELLDR ILSRGGKYTE EDAKTVMIQI LNVVAFCHLQ GVVHRDLKPE NFLFTSKEDT SQLKAIDFGL
301: SDYVRPDERL NDIVGSAYYV APEVLHRSYS TEADIWSVGV IVYILLCGSR PFWARTESGI FRAVLKADPS FDDPPWPLLS SEARDFVKRL LNKDPRKRLT
401: AAQALSHPWI KDSNDAKVPM DILVFKLMRA YLRSSSLRKA ALRALSKTLT VDELFYLREQ FALLEPSKNG TISLENIKSA LMKMATDAMK DSRIPEFLGQ
501: LSALQYRRMD FEEFCAAALS VHQLEALDRW EQHARCAYEL FEKEGNRPIM IDELASELGL GPSVPVHAVL HDWLRHTDGK LSFLGFVKLL HGVSSRTIKA
601: H
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)