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AT2G32010.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : CVP2 like 1
Curator
Summary (TAIR10)
Encodes an inositol polyphosphate 5’-phosphatase (5PTase). Mediating phosphoinositide signaling. Involved in establishment of foliar vein patterns.
Computational
Description (TAIR10)
CVP2 like 1 (CVL1); FUNCTIONS IN: hydrolase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: leaf vascular tissue pattern formation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Inositol polyphosphate related phosphatase (InterPro:IPR000300), Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT1G05470.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-390-MONOMEREC:3.1.3.36EC:3.1.3.86eggNOG:COG5411
eggNOG:KOG0565EMBL:AC006223EMBL:AJ277885EMBL:AK228865
EMBL:CP002685EnsemblPlants:AT2G32010EnsemblPlants:AT2G32010.1EnsemblPlants:AT2G32010.2
entrez:817761Gene3D:3.60.10.10GeneID:817761Genevisible:Q0WQ41
GO:GO:0004439GO:GO:0005634GO:GO:0005886GO:GO:0010305
GO:GO:0034485GO:GO:0046856GO:GO:0071472GO:GO:2000377
Gramene:AT2G32010.1Gramene:AT2G32010.2hmmpanther:PTHR11200hmmpanther:PTHR11200:SF174
HOGENOM:HOG000241161InParanoid:Q0WQ41InterPro:IPR000300InterPro:IPR005135
KEGG:ath:AT2G32010OMA:WSMEENDPaxDb:Q0WQ41Pfam:PF03372
PhylomeDB:Q0WQ41PIR:H84727PRIDE:Q0WQ41PRO:PR:Q0WQ41
ProteinModelPortal:Q0WQ41Proteomes:UP000006548Reactome:R-ATH-1660514Reactome:R-ATH-1855183
Reactome:R-ATH-1855204Reactome:R-ATH-194840RefSeq:NP_001189654.1RefSeq:NP_180761.2
SMART:SM00128SMR:Q0WQ41STRING:3702.AT2G32010.1SUPFAM:SSF56219
TAIR:AT2G32010tair10-symbols:CVL1UniGene:At.13598UniProt:Q0WQ41
Coordinates (TAIR10) chr2:+:13625344..13628081
Molecular Weight (calculated) 68248.90 Da
IEP (calculated) 9.64
GRAVY (calculated) -0.83
Length 594 amino acids
Sequence (TAIR10)
(BLAST)
001: MRDDKTKKSK LSWSKKMVRK WFNIKSKTEK FQADVSLPQG VEVEHRNSFS EREPCTIKKS KTEKLNKNWE QQARQRKMNY ENPRIIDVQN HSIFVATWNV
101: AGRSPPEDLN LDEWLHSSAP ADIYVLGFQE IVPLNAGNVL GAEDNGPAKK WHSLIRKTLN NLPGASSACH TPSPIPVPIA EIDADFSGSS RQKNETFFNR
201: RSFQTPSVWS MEENDPSISQ PRLDRRFSVC DRVFFSHRPS DFDPSFRCGH RPSDYSRRPS DYSRPSDYYS RPSNYSRPSD VSRWGSSDDD NGPGDSPSTF
301: LNSPGSFLGS AANENGYRTP WNSSQYCLVA SKQMVGIFLT IWVKSELREH VKNMKVSCVG RGLMGYLGNK GSISISMLLH QTSFCFVCTH LTSGQKEGDE
401: LRRNSDVMEI LKKTRFPRVQ SSADEKSPEN ILQHDRVIWL GDLNYRIALS YRSAKALVEM QNWRALLEND QLRIEQKRGH VFKGWNEGKI YFPPTYKYSN
501: NSDRYAGGDL HPKEKRRTPA WCDRILWHGE GLHQLSYVRG ESRFSDHRPV YGIFSAEVES NHKRSKRTNS HSTARVEAEE LLPYARGYTE LTFF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)