AT2G46710.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.617 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Rho GTPase activating protein with PAK-box/P21-Rho-binding domain | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; FUNCTIONS IN: Rac GTPase activator activity; INVOLVED IN: signal transduction; LOCATED IN: intracellular; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PAK-box/P21-Rho-binding (InterPro:IPR000095), Rho GTPase activation protein (InterPro:IPR008936), RhoGAP (InterPro:IPR000198); BEST Arabidopsis thaliana protein match is: Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (TAIR:AT4G03100.1); Has 3093 Blast hits to 3092 proteins in 169 species: Archae - 0; Bacteria - 0; Metazoa - 2259; Fungi - 327; Plants - 185; Viruses - 0; Other Eukaryotes - 322 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:19192105..19194656 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 50785.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.11 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.49 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 455 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MTNFSRSKST GTIGFPEFKP TRPGPDKYEN IHNDDDEYEE GHSTTSTDYY DASTPLSSHA SRSGNGSGSG QLTVVDLLAA VLRKSLVMSC AMERGEDDVV 101: ASMDIGWPTE VKHVSHVTFD RFNGFLGLPS ELEPEVPPRA PSASVSVFGV SAKSMQCSYD DRGNSVPTIL LRMQKRLYTE GGLKAEGIFR INPDNGKEEH 201: VRRQLNCGVV PRGIDVHCLA GLIKAWFREL PTGVLDVLTP EQVMRCNTEE DCSRLVILLP PVESAILDWA IGLMADVVEH EQFNKMNARN VAMVFAPNMT 301: QMADPLTALI HAVQVMNFLK TLILMNLKER ENADAKARWL KKQTSDPSEE WESQHSEILS PEKPNNNNPK FLRVATLCRL EADNEEEFWN IKKRNDHEGV 401: LDTSSGNGNI GPVQRLCKHP LFQLSKSTKK AFVSNRDEGR KGREAWSSRL SSLPW |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)