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AT3G47940.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
cytosol 0.995
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAJ heat shock family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAJ heat shock family protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), HSP40/DnaJ peptide-binding (InterPro:IPR008971), Chaperone DnaJ, C-terminal (InterPro:IPR002939), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095), Heat shock protein DnaJ, conserved site (InterPro:IPR018253); BEST Arabidopsis thaliana protein match is: DNAJ heat shock family protein (TAIR:AT1G10350.1); Has 27840 Blast hits to 26488 proteins in 3397 species: Archae - 203; Bacteria - 10747; Metazoa - 4580; Fungi - 2597; Plants - 2794; Viruses - 15; Other Eukaryotes - 6904 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0484eggNOG:KOG0714EMBL:AL049658EMBL:AY136346EMBL:BT000189EMBL:CP002686EnsemblPlants:AT3G47940
EnsemblPlants:AT3G47940.1entrez:823949Gene3D:1.10.287.110GeneID:823949GO:GO:0006457Gramene:AT3G47940.1hmmpanther:PTHR24078
hmmpanther:PTHR24078:SF317HOGENOM:HOG000226718InterPro:IPR001623InterPro:IPR002939InterPro:IPR008971InterPro:IPR018253KEGG:ath:AT3G47940
KO:K09510OMA:RNGHFNTPfam:PF00226Pfam:PF01556Pfscan:PS50076PhylomeDB:Q9SU57PIR:T06689
PRINTS:PR00625PROSITE:PS00636PROSITE:PS50076Proteomes:UP000006548Reactome:R-ATH-3371453Reactome:R-ATH-3371568Reactome:R-ATH-3371571
Reactome:R-ATH-5687128RefSeq:NP_190377.1scanprosite:PS00636SMART:SM00271SMR:Q9SU57STRING:3702.AT3G47940.1SUPFAM:SSF46565
SUPFAM:SSF49493TAIR:AT3G47940UniGene:At.35757UniProt:Q9SU57
Coordinates (TAIR10) chr3:-:17688232..17689402
Molecular Weight (calculated) 39029.50 Da
IEP (calculated) 9.70
GRAVY (calculated) -0.70
Length 350 amino acids
Sequence (TAIR10)
(BLAST)
001: MGVDYYNILK VNHNATEDDL KKAYKRLAMI WHPDKNPSTR RDEAEAKFKR ISEAYDVLSD PQKRQIYDLY GEEGLKSGKI PNSSSSEASS SSSSSSSRYP
101: HFHQHRPQHP PNASSFRFNP RDAEDIYAEF FGSENGGGSN NAGGRGNRAF RNGHFNTGGA NGYSGEMRKV PAMENPLPVS LEDLYKGVVK KMRITRNVYD
201: ASGRMMVEAE ILPIEIKPGW KKGTKLTFPK KGNEEPGIIP ADIVFVVEEK PHPVYKRDGN DLLVSQEITL LEALTGKTVN LITLDGRTLM IPLTEIIKPD
301: HEIVVPNEGM PISKEPGKKG NLKLKLSVKY PSRLTSDQKF ELKRVLGGVS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)