AT3G18350.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.656 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Plant protein of unknown function (DUF639) | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Plant protein of unknown function (DUF639); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF639 (InterPro:IPR006927); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF639) (TAIR:AT1G48840.1); Has 149 Blast hits to 146 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:6297524..6300500 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 78226.40 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.25 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||
| Length | 692 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSSKTRNMLE GLVRDTSFKW LLGKQSSFDE EIEEMGRSPS AGTNWIPELS PIANVVVRRC SKILGVSANE LRDSFKQEAF ESLKQPSLFP RNFLEYCCFR 101: ALSLSVGVTG HLADKKFRRL TFDMMVVWEV PAVASQALLS VEEDATVSLE AFSRIAPAVP IIADVIICDN LFQMLTSSTG GRLQFSVYDK YLHGLERAIK 201: KMRTQSESSL LSGVRSKREK ILEIDGTVTT QPVLEHVGIS TWPGRLILTD HSLYFEALKV VSYDTPKRYH LSEDLKQIIK PELTGPWGTR LFDKAVSYQS 301: ISLSEPVVME FPELKGHTRR DYWLTIIQEV LYVHRYINKY KITGLARDEA LSKAVLGVMR VQALQELNLT NAMRYENLLP FNLCDQLPGG DLILETLAEM 401: STSRELHRSN KSKDTGTLHS SASDMVSQLG SVFGGSSPRS RRETSSLVVG EVVVGDVNPL ERAVKESRKK YEKVVLAQET INGVKMGGID TNLAVMKELM 501: LPIMETWNLI LSVVYWDDPT KSSVFCLLTT FIIWRGWLVY VFALASLFSA IFMVLTRCFS REKLMIELKV TAPPPMNTME QLLAVQNGIS ELEQNIQDAN 601: IVLLKFRALL FSLFPQASQK FAIAIVVAAT MMAFVPGRYL LSVVFVELFT RYSPPRRAST ERLIRRLREW WFSIPAAPVV LLHDKNNKKK KN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)