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AT2G32900.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.841
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : centromere/kinetochore protein, putative (ZW10)
Curator
Summary (TAIR10)
homologous to Drosophila ZW10, a centromere/kinetochore protein involved in chromosome segregation
Computational
Description (TAIR10)
ATZW10; INVOLVED IN: chromosome segregation; LOCATED IN: chromosome, centromeric region, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Centromere/kinetochore protein Zw10 (InterPro:IPR009361); Has 272 Blast hits to 258 proteins in 128 species: Archae - 0; Bacteria - 2; Metazoa - 125; Fungi - 86; Plants - 38; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Protein Annotations
BioGrid:3198eggNOG:ENOG410XQ7JeggNOG:KOG2163EMBL:AC003033
EMBL:AK117917EMBL:AY069883EMBL:CP002685EMBL:U80984
EnsemblPlants:AT2G32900EnsemblPlants:AT2G32900.1entrez:817851GeneID:817851
Genevisible:O48626GO:GO:0000777GO:GO:0005634GO:GO:0005789
GO:GO:0005819GO:GO:0006888GO:GO:0007059GO:GO:0007067
GO:GO:0007094GO:GO:0015031GO:GO:0051301GO:GO:1990423
Gramene:AT2G32900.1hmmpanther:PTHR12205hmmpanther:PTHR12205:SF0HOGENOM:HOG000085043
InParanoid:O48626InterPro:IPR009361KEGG:ath:AT2G32900KO:K11578
OMA:PLASHDRPaxDb:O48626Pfam:O48626Pfam:PF06248
PhylomeDB:O48626PIR:T01117PRIDE:O48626PRO:PR:O48626
ProteinModelPortal:O48626Proteomes:UP000006548RefSeq:NP_565757.2STRING:3702.AT2G32900.1
TAIR:AT2G32900tair10-symbols:ATZW10UniGene:At.10487UniGene:At.66361
UniGene:At.69626UniProt:O48626
Coordinates (TAIR10) chr2:+:13953807..13957470
Molecular Weight (calculated) 83938.00 Da
IEP (calculated) 4.98
GRAVY (calculated) -0.03
Length 742 amino acids
Sequence (TAIR10)
(BLAST)
001: MPEIDALFES INVRDLLAGH DLNDPTTPLS APDLRLLINR LESHSLRIKS KVQSYLVAHH SDFSELFSLC QDTVSRTRLI SDDVSDVLQL VSDRPIDVEI
101: RSVVDEITEK TKEVKLKRES LDLVNAIVGI CEALQETKEA LKNGRFRFAA ERIRELKVVL RIGEEEDGEP VAYALLRKEW SNCFDEIQEV LAKFMENAVR
201: FELDSSRIRI KYQLSVGETA GIALSTVLEA MEVIGILDYG LAKAADSIFK HVITPAVTHA STFAAVEDLC KSAGEVTEAT LRLEQSSDHK FEDVDGDAMY
301: SGILKVVKFI CSSLCFGNVT WIHSFGRLTW PRISELIISK FLSKVVPEDA SKLADFQKII ERTSQFEAAL KELNFVSSSD AESRLSKYAE DVEVHFASRK
401: KIEILAKARN LLLQCNFTIP QDIAMRNAKH IVCLLFSSER CVVSEAASQL MNLVHKTLED VCVSSARVAS EFYNAARDSI LLYEAVVPVK LEKQLDGLNE
501: AAVLLHNDCL YLFEEILGLA FEYRASFPSS IKEYAVFADI APRFKLMAEE VLQKQVHLVI SSLREAIDSA DGFQNTHQIK QFKSAEFSID QVVFSLKNVH
601: MIWEPVLRPK TYKQSMCAVL ESVFRRIARD ILLLDDMAAD ETFELQKLIY LMLKNLSSVL DSVRSADETS RPLDDIIPSL RKTRKLAELL DMPLMSITSA
701: WESGELFRCN FTRTEVQDFI KAIFTDSPLR KECLWRIDEV NQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)