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AT1G61850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phospholipases;galactolipases
Curator
Summary (TAIR10)
Encodes a non-specific lipase that hydrolyzes phospholipids as well as galactolipids, at both sn-1 and sn-2 positions. Involved in basal jasmonic acid biosynthesis by releasing the precursor fatty acid from membrane lipids. Mutant plants were impacted in resistance to fungus B. cinerea.
Computational
Description (TAIR10)
phospholipases;galactolipases; FUNCTIONS IN: phospholipase activity, galactolipase activity; INVOLVED IN: response to fungus, jasmonic acid biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Armadillo-like helical (InterPro:IPR011989), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: plant intracellular ras group-related LRR 2 (TAIR:AT3G26500.1); Has 20427 Blast hits to 10030 proteins in 743 species: Archae - 51; Bacteria - 3224; Metazoa - 10329; Fungi - 1071; Plants - 3980; Viruses - 0; Other Eukaryotes - 1772 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XQXJeggNOG:KOG4231EMBL:CP002684EnsemblPlants:AT1G61850
EnsemblPlants:AT1G61850.1entrez:842482ExpressionAtlas:F4HX14Gene3D:1.25.10.10
Gene3D:3.80.10.10GeneID:842482GO:GO:0004620GO:GO:0006629
GO:GO:0009620GO:GO:0009695GO:GO:0047714Gramene:AT1G61850.1
gramene_pathway:3.1.1.32gramene_pathway:LIPASYN-PWYhmmpanther:PTHR24185hmmpanther:PTHR24185:SF1
InParanoid:F4HX14InterPro:IPR000225InterPro:IPR001611InterPro:IPR002641
InterPro:IPR003591InterPro:IPR011989InterPro:IPR016024InterPro:IPR016035
InterPro:IPR032675iPTMnet:F4HX14ncoils:CoilOMA:RSLETFC
PaxDb:F4HX14Pfam:PF00514Pfam:PF01734Pfam:PF13855
PRIDE:F4HX14ProteinModelPortal:F4HX14Proteomes:UP000006548RefSeq:NP_176378.4
SMART:SM00185SMART:SM00369SMR:F4HX14STRING:3702.AT1G61850.1
SUPFAM:SSF48371SUPFAM:SSF52058SUPFAM:SSF52151TAIR:AT1G61850
UniGene:At.52315UniProt:F4HX14
Coordinates (TAIR10) chr1:+:22856317..22862225
Molecular Weight (calculated) 145387.00 Da
IEP (calculated) 5.74
GRAVY (calculated) -0.19
Length 1311 amino acids
Sequence (TAIR10)
(BLAST)
0001: MSSTCSSPSA VEDPELGFRI DLDWTAGDSE DQVALRLESQ LMVALPAPHD TVVVELKGIG DDDEGGLENV GLEMRVEKRR EPLRAVTLMK AVGSGQQYDG
0101: VGVLTRLMRS DMMPAAIPAP AIDVASSCGV HWKTVTSLSL SGCGLLVMPV EVTELPLLEK LCLEHNKLSV LPPEIGKLKN LKILRVDNNM LISVPVELRQ
0201: CVGLVELSLE HNKLVRPLLD FRAMAGLRIL RLFGNPLEFL PEILPLHQLR HLSLVNIRIV SDENLRSVNV QIETENTSYF GASRHKLSAF SPLIFRSSSC
0301: HHPLLASTLV KIMQDEGNRS VIGKDENAVR QLISMITSDN QHVVEQACVA LSSLARDVGV AMQLMKCDIM KPTETVLKSS SPDEVISVLQ VVVTLAFVSD
0401: SVSQKMLTKD MLKALKSLCA HKNPEVQRQA LLAVGNLAFC LENRRILITS ESLRELLMRL IVTPEPRVNK AAARALAILG ENEILRRSIK GRQVPKQGLR
0501: ILTMDGGGMK GLATVQILKE IEKGSGKPIH ELFDLICGTS TGGMLAIALG VKLMTLEQCE EIYKNLGKLV FAESVPKDNE AASWREKLDQ LYKSSSQSFR
0601: VVIHGSKHSA NEFERLLKEM CADEDGDLLI ESAVKNVPKV FVVSTLVSVM PAQPFIFRNY QYPVGTPEMS YAFSDHSGGS TLTSSTASDQ AGYYKQSAFM
0701: GSCKHQVWQA IRASSAAPYY LDDFSVGTNS YRWQDGAIVA NNPTIFAIRE AQLLWPDTKI DCLVSIGSGS VPTRVRKGGW RYLDTGQVLI ESACSVERVE
0801: EALSTLLPML PEIQYFRFNP VDDRCGMELD ETDPAIWLKL EAAIEEFIQS NPQVFKNVCE RLTLPFLNDE KWCDNLKPRF MNGKLPNSRV ESSPSLGWRR
0901: NVLLMEAQHS PDSGRVKYHA RALESFCSNN GIKLSSLHTT ATPGCQKPSP GTAFPTPFTS PLITGSLPPS PLLFTPELGP QKFNRIDMVP PLSLDGGHVG
1001: KTVMSPPSSP PRQRQLYLPL RQMHEKLQNL PQVGILHLSL QNDSNGSILS WQNDVFVVAE PGDLADKFLQ SVKVSILSVM QSNRRKAASV LSNICSISDL
1101: VRSKKCFQVG NIIHRYIGRQ TLVMEDDQEI ASFMFRRTVP SAHLTPDDIR WMVGAWRDRI IVFSGTFGPT QAVVKAFLDS GAKAVIGPSN EPQETPLITS
1201: QGSSEYNIGD QNGKFEIGEE EDEDEEVNEE TEREEMEPPT PTSDWEDSDH EKTNRDGKYC GLWEDDEEEV SEFVCQLYDQ LFRENSRVDV ALQKALASHR
1301: KLRYTCHLPN V
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)