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AT4G32160.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phox (PX) domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phox (PX) domain-containing protein; CONTAINS InterPro DOMAIN/s: Phox-like (InterPro:IPR001683); BEST Arabidopsis thaliana protein match is: Phox (PX) domain-containing protein (TAIR:AT2G25350.1); Has 33521 Blast hits to 21186 proteins in 1483 species: Archae - 481; Bacteria - 3615; Metazoa - 17372; Fungi - 2745; Plants - 1628; Viruses - 165; Other Eukaryotes - 7515 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IK2NeggNOG:ENOG4110T18EMBL:CP002687EnsemblPlants:AT4G32160
EnsemblPlants:AT4G32160.1entrez:829348Gene3D:3.30.1520.10GeneID:829348
GO:GO:0035091Gramene:AT4G32160.1hmmpanther:PTHR10555hmmpanther:PTHR10555:SF156
InParanoid:F4JTJ2InterPro:IPR001683KEGG:ath:AT4G32160ncoils:Coil
OMA:PPRKWNGPaxDb:F4JTJ2Pfam:PF00787Pfscan:PS50195
PRIDE:F4JTJ2PROSITE:PS50195ProteinModelPortal:F4JTJ2Proteomes:UP000006548
RefSeq:NP_567888.2SMART:SM00312SUPFAM:SSF64268TAIR:AT4G32160
UniGene:At.26639UniProt:F4JTJ2
Coordinates (TAIR10) chr4:+:15529056..15532892
Molecular Weight (calculated) 81815.50 Da
IEP (calculated) 5.25
GRAVY (calculated) -0.69
Length 723 amino acids
Sequence (TAIR10)
(BLAST)
001: MMQRRSPPKH RHDGTSPLPL GMDWSPPPRK WNGRDTVWPH DPRTGWSYCV TIPSWIVLPK SRNSDPVVFY RVQVSVQSPE GITTMRGVLR RFNDFLKLLT
101: DLKRTFPRKG FPSAPPKGLL RMKSRAVLEE RRCSLEEWIT KLLSDIELAR SVVVASFLEL EAAARSACQD VDQNASDSNN DRSSTSSSPM VHPSLSLFHA
201: GGSTLTSDYG SDTAYETSEV GSPSVGQDDI SEIGTEDLTL DEDLTLTNPI EKLVNFSMSN IDEGLSMSET ILEQLEDFPK HKVRSRYVNN ILGKDVYNGN
301: ASKGVFLANN GSRLLSEPEP STHSVMHDRN DSAERFALHT GQTSTSGLLI SSRDSHLDLR QGPGVSLGTG LVCNPERQGS AQIVLPLELR NKLNRILLAT
401: NERLVNAKTD MEDLIARLNQ EIAVKDYLNK KVNDLEGELE TTKQRSKENL EQAIMSERER FNQMQWDMEE LRQKSYEMEM KLKSREDGSS HAEPTVQSTI
501: SEKHVLSKEL DARKQQLEDL SRRYEELEAK SKADMKVLVK EVKSLRRSHV ELEKELTHSL TDKTNAEKLL QEERKLLENT VAARKKLLSD CRILHDRLKE
601: YNLNLSMDGN GNFVDDSTTI SDVLRLLSIS DDQIEEAQLL SGFDENAAAE DIDKTLSMDT ETRIMEDELR KILANIFVEN AKLRKQVNSA MLRALQKDVK
701: TTEDVNEENS DEKDEASRET LKR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)