AT1G24560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49055.1); Has 71940 Blast hits to 38124 proteins in 2481 species: Archae - 1358; Bacteria - 12126; Metazoa - 32861; Fungi - 6786; Plants - 4024; Viruses - 195; Other Eukaryotes - 14590 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:8702644..8705640 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 76505.10 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.64 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.73 | ||||||||||||||||||||||||
| Length | 678 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MANGADEDAV LSDVESDEPA PVVLKDSPRE EASDERITEL IAELDREKKA REAAESSKSE LQVSFNRLKA LAVEAIKKRD ESKRERDEAL KEKENLTNEL 101: ENVNKGKDEM SKKLDEALRS RDGLKAEIEN SSHMLVSGIE KISGKVSSFK NFSNGGLPKS QKYTGLTSVA YGVIKRTNEI VEELVRQIDT TAKSRNEARE 201: QMDQRNYEIA IEVSQLESAI SNLRLEVAEK ASIVDDLERG VSEKEKRIAE LEKGNLEKVS LLEGEVVELK QLVDEYDGKL KTMELKMVAQ RPLLMDQLNL 301: VSRIHDQLYE VVRIVDGNSS EQSDLSESFF MPQETEMEEN IRASLAGMES IFELTKVVSG KAQSLVEEKS HELKNLNETV GLLVKEKEHI GTLLRSALSK 401: RVIGEQPSQK RELFQAAENG LRDGGTDSKF AKLLKDGKVQ DSRSDNTHDH SKEDNEIYSL ASTLENIVKA SQLEIVELQH LLEASREETS SLRKQLDTQT 501: KELNQRMRQI EELKEKERIA NENVEGLMTD IAAAEEEITR WKVAAEQEAA AGGAVEQDFT SQLYVLKEEL EEAKQAIIES EKKLKFKEET AAAAMGARDA 601: AERSLRLADN RATKLRERIQ ELNRKVEELE THRDMNTSNR ARYACWPWQL LGIDFVGSRR IESGQESANE MELAEPLL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)