AT2G37420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ATP binding microtubule motor family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ATP binding microtubule motor family protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45850.2); Has 44433 Blast hits to 32365 proteins in 1868 species: Archae - 445; Bacteria - 6202; Metazoa - 19487; Fungi - 4140; Plants - 3247; Viruses - 113; Other Eukaryotes - 10799 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:15700550..15705165 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 117588.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.87 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1039 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MSFTPEVVSR KSGVGVIPSP APFLTPRLER RRPDSFSNRL DRDNKEVNVQ VILRCKPLSE EEQKSSVPRV ISCNEMRREV NVLHTIANKQ VDRLFNFDKV 0101: FGPKSQQRSI YDQAIAPIVH EVLEGFSCTV FAYGQTGTGK TYTMEGGMRK KGGDLPAEAG VIPRAVRHIF DTLEAQNADY SMKVTFLELY NEEVTDLLAQ 0201: DDSSRSSEDK QRKPISLMED GKGSVVLRGL EEEVVYSAND IYALLERGSS KRRTADTLLN KRSSRSHSVF TITVHIKEES MGDEELIKCG KLNLVDLAGS 0301: ENILRSGARD GRAREAGEIN KSLLTLGRVI NALVEHSSHV PYRDSKLTRL LRDSLGGKTK TCIIATISPS AHSLEETLST LDYAYRAKNI KNKPEANQKL 0401: SKAVLLKDLY LELERMKEDV RAARDKNGVY IAHERYTQEE VEKKARIERI EQLENELNLS ESEVSKFCDL YETEKEKLLD VESDLKDCKR NLHNSNKDLL 0501: DLKENYIQVV SKLKEKEVIV SRMKASETSL IDRAKGLRCD LQHASNDINS LFTRLDQKDK LESDNQSMLL KFGSQLDQNL KDLHRTVLGS VSQQQQQLRT 0601: MEEHTHSFLA HKYDATRDLE SRIGKTSDTY TSGIAALKEL SEMLQKKASS DLEKKNTSIV SQIEAVEKFL TTSATEASAV AQDIHNLLND QKKLLALAAR 0701: QQEQGLVRSM RSAQEISNST STIFSNIYNQ AHDVVEAIRA SQAEKSRQLD AFEMKFKEEA EREEKQALND ISLILSKLTS KKTAMISDAS SNIREHDIQE 0801: EKRLYEQMSG MQQVSIGAKE ELCDYLKKEK THFTENTIAS AESITVMDSY LEDCLGRAND SKTLWETTET GIKNLNTKYQ QELNVTMEDM AKENEKVQDE 0901: FTSTFSSMDA NFVSRTNELH AAVNDSLMQD RENKETTEAI VETCMNQVTL LQENHGQAVS NIRNKAEQSL IKDYQVDQHK NETPKKQSIN VPSLDSIEEM 1001: RTLFSQNTLS EEHTSLEKIS TKQGLGEANN RTPFLEVNK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)