AT2G36810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.866 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ARM repeat superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); Has 392 Blast hits to 295 proteins in 82 species: Archae - 0; Bacteria - 2; Metazoa - 305; Fungi - 6; Plants - 46; Viruses - 0; Other Eukaryotes - 33 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:15425739..15439462 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 189434.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.24 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 1716 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MASSSLGSSI PAPEAVQLLV SSLADDSSVV REASMASLRD IASLNPLLVL DCCYAVSRGG RRRFGNMAGV FQVMAFSVGA LEKGESDSVF MGKLAKIATA 0101: EIISSKELNA DWQRQASGLL VSIGTHFPDL MMEEIFLHLS GPATAAPAMV QILADFASSD ALQFTPRLKG VLSKVSPILG NVRDIHRPIF ANAFKCWSQA 0201: VWLYITDLTS DSPLDSDVMS FLNSVFELLL RVWAVSRDHK VRVSTVDALG QMVGLITRTQ LKSALPRLIP AILELYKKDH DDALLATCSL HNLLNASLLS 0301: ESGPPLLDFE DLTIVLSTLL PVIGINNERK RFSDISVGRK TYNEVQRCFL TVGLVYPEDL FTFLLNKCKL KEDPLTFGAL CILKHLLPRL FEAWHSKRPL 0401: LVDTASSLLD EQSLAVRKAL SELIVVMASH CYLVGPSGEL FVEYLVRHSA IGESDHLKAK GELVSPTQLR AVCGKGLLLL TVTIPEMELS DFNAKEYMKL 0501: QYILWPFLLK MIIPKVYTGA VASVCRCITE LCRRRSSTTP MLIECKARAD IPNPEELFTR LVVLLHNPLA KEQLASQILT VLGYLSPLFP KNISMFWQDE 0601: IPKMKAYVYD TEDLKLDPTY QETWDDMIIN FLAESLDVTQ DADWVISLGN SFAKQYILYA PDDDHAALLH RCIGILLQKV NDRAYVRDKI DWMYEQADIS 0701: IPANRLGLAK AMGLVAASHL DTVLEKLKII VDNVGQSIFQ RILSLFSESY KTEDSDDIHA ALALMYGYAA KYAPSSVIEA RIDALVGTNM LSRLLHVRQQ 0801: TAKQAVITAI DLLGRAVINA AETGATFPLK RRDQMLDYIL TLMGRDENEG FAESSLEVLH TQALALNACT TLVSVEPKLT IETRNRVMKA TLGFFALPND 0901: PSDVISPLID NLVTLLCAIL LTSGEDGRSR AEQLLHLLRQ LDQYVSSPID YQRKRGCVAV HEMLLKFRKL CVGGYCALGC SGDCPHRKYA DRSMQGNFSN 1001: LPSVFLFPDR EVLCLGDRVI TYLPRCADTN SEVRKISAQI LDQFFSISLS LPKAVLTSGL DSEDSYKALS SLEDVIAILK SDASIDPSEV FNRIVSSICS 1101: LLTEHELVAA LHSCTAAICD KIRQSAEGAI QAVTEFVSRR GSQLSDNDIS RTTHSLLSAA VHITDKNLRV EAIGAISALA ENTQSSIVFN EVLATAGKDI 1201: VTKDITRMRG GWPMQDAFYA FSQHTELSVL FMEHLISILN RSSLVKSDSH KGENTSSSSE THVEDDILQA AIFALTAFFR GGGKIGKKAV EKSYSSVVGA 1301: LTLQLGSCHG LASSGQQDPL RVLLTSFQAF CECVGDLEMG KILARNGEQI EKEKWVGLIG DIAGCISIKR PKEVRHICMI LTKALNRPQR FQREAAAAAL 1401: SEFIRYSGDF SSVMEEMVEA LCRHVSDDSP TVRRLCLRGL VQMPSACMSH YTTQVIGVIL ALLDDLDESV QLTAVSCLLM VTESASNDAV EPILLNLSVR 1501: LRNLQVSMDP KMRANAFSAL GALSKYATGG QREGFVEQIH STLPRLVVHL HDDDPSIRQA CRVTLKRFAP LVDIINYSTL YDSRAFGSED RTDYENFVRD 1601: LSKHLVQESE RVDTYMASTI QAFDAPWPVI QANAIHFSTT MLSLSEDQHI ISLYYPQVFE TLVSKMTRSQ DSVVRAACSS AFGLLLRSSK STLWRGARLD 1701: GTDSGRKAND LESVKK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)