AT2G33310.1::SUBA5

AT2G33310.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
nucleus 1.000
What is SUBAcon?

Predictors

External Curations

SwissProt : nucleus 16381842

Experimental Localisations and PPI

FP	MS/MS	PPI
		PMID:32612234 (2020): AT5G25890.1:None: PMID:32612234 (2020): AT5G57420.1:None: PMID:32612234 (2020): AT2G01200.1:None: PMID:32612234 (2020): AT1G51950.1:None: PMID:32612234 (2020): AT4G28640.1:None: PMID:32612234 (2020): AT5G65670.1:None: PMID:32612234 (2020): AT1G15580.1:None: PMID:32612234 (2020): AT3G23050.1:None: PMID:32612234 (2020): AT1G80390.1:None: PMID:32612234 (2020): AT1G04250.1:None: PMID:32612234 (2020): AT1G04100.1:None: PMID:32612234 (2020): AT3G04730.1:None: PMID:32612234 (2020): AT3G16500.1:None: PMID:32612234 (2020): AT2G22670.1:None: PMID:32612234 (2020): AT4G14560.1:None: PMID:32612234 (2020): AT3G23030.1:None: PMID:32612234 (2020): AT3G17600.1:None: PMID:32612234 (2020): AT4G29080.1:None: PMID:32612234 (2020): AT1G04240.1:None: PMID:32612234 (2020): AT1G52830.1:None: PMID:32612234 (2020): AT5G43700.1:None: PMID:32612234 (2020): AT2G46990.1:None: PMID:32612234 (2020): AT3G15540.1:None: PMID:32612234 (2020): AT1G04550.1:None: PMID:32612234 (2020): AT1G15050.1:None: PMID:28650476 (2017): AT4G28640.1:None: PMID:28650476 (2017): AT1G04100.1:None: PMID:28650476 (2017): AT4G14550.1:None: PMID:28650476 (2017): AT3G23050.1:None: PMID:28650476 (2017): AT5G25890.1:None: PMID:28650476 (2017): AT1G15050.1:None: PMID:28650476 (2017): AT4G29080.1:None: PMID:28650476 (2017): AT3G16500.1:None: PMID:28650476 (2017): AT3G15540.1:None: PMID:28650476 (2017): AT1G52830.1:None: PMID:28650476 (2017): AT4G14560.1:None: PMID:28650476 (2017): AT5G57420.1:None: PMID:28650476 (2017): AT1G04250.1:None: PMID:28650476 (2017): AT3G23030.1:None: PMID:28650476 (2017): AT5G43700.1:None: PMID:28650476 (2017): AT1G04240.1:None: PMID:28650476 (2017): AT3G04730.1:None: PMID:28650476 (2017): AT2G22670.1:None: PMID:28650476 (2017): AT1G19220.1:None: PMID:28650476 (2017): AT3G17600.1:None: PMID:28650476 (2017): AT1G15580.1:None: PMID:28650476 (2017): AT2G01200.1:None: PMID:22096563 (2011): AT1G19850.1:other: PMID:22096563 (2011): AT1G59750.1:other: PMID:21734647 (2011): AT1G19850.1:Y2H: PMID:21734647 (2011): AT1G04240.1:Y2H: PMID:21734647 (2011): AT1G30330.1:Y2H: PMID:21734647 (2011): AT5G20730.1:Y2H: PMID:21734647 (2011): AT5G65670.1:Y2H: PMID:21734647 (2011): AT3G04730.1:Y2H: PMID:21734647 (2011): AT5G37020.1:Y2H: PMID:21734647 (2011): AT3G62100.1:Y2H: PMID:21734647 (2011): AT4G14550.1:None: PMID:21734647 (2011): AT3G15540.1:Y2H: PMID:21734647 (2011): AT1G04550.1:Y2H: PMID:21734647 (2011): AT1G15050.1:Y2H: PMID:21734647 (2011): AT1G04250.1:Y2H: PMID:21734647 (2011): AT4G29080.1:None: PMID:21734647 (2011): AT1G80390.1:None: PMID:14729917 (2004): AT5G37020.1:Y2H: PMID:14729917 (2004): AT1G19850.1:Y2H: PMID:14729917 (2004): AT5G20730.1:Y2H: PMID:14729917 (2004): AT2G33310.1:Y2H:

SUBAcon links
AGI-AGI relationships

Coexpression

PPI

AT1G04550.1 nucleus [8.02]
AT5G65670.1 nucleus [6.76]
AT1G68810.1 nucleus [6.64]
AT4G28640.1 nucleus [6.19]
AT5G19530.1 plasma membrane [6.13]
AT1G51170.1 nucleus [5.91]
AT3G15540.1 nucleus [5.89]
AT4G37590.1 nucleus [5.89]
AT5G43700.1 nucleus [5.79]
AT4G09890.1 nucleus [5.77]

AT3G04730.1 nucleus
AT5G65670.1 nucleus
AT5G57420.1 nucleus
AT5G43700.1 nucleus
AT5G25890.1 nucleus
AT4G29080.1 nucleus
AT4G28640.1 nucleus
AT4G14560.1 nucleus
AT4G14550.1 nucleus
AT3G62100.1 nucleus
AT3G23050.1 nucleus
AT3G23030.1 nucleus
AT3G17600.1 nucleus
AT3G16500.1 nucleus
AT3G15540.1 nucleus
AT1G04100.1 nucleus
AT2G46990.1 nucleus
AT2G22670.1 nucleus
AT2G01200.1 nucleus
AT1G80390.1 nucleus
AT1G59750.1 nucleus
AT1G52830.1 nucleus
AT1G51950.1 nucleus
AT1G19850.1 nucleus
AT1G19220.1 nucleus
AT1G15580.1 nucleus
AT1G15050.1 nucleus
AT1G04550.1 nucleus
AT1G04250.1 nucleus
AT1G04240.1 nucleus

Description (TAIR10)

protein_coding : auxin-induced protein 13

Curator
Summary (TAIR10)

Auxin induced gene, IAA13 (IAA13).

Computational
Description (TAIR10)

auxin-induced protein 13 (IAA13); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: response to auxin stimulus, response to cyclopentenone; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: AUX/IAA transcriptional regulator family protein (TAIR:AT1G04550.2); Has 1984 Blast hits to 1983 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1983; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

Protein Annotations

EnsemblPlants:AT2G33310	EnsemblPlants:AT2G33310.1	entrez:817894	hmmpanther:PTHR31734
hmmpanther:PTHR31734:SF10	Pfam:PF02309	Pfscan:PS51745	SUPFAM:SSF54277
tair10-symbols:IAA13

Coordinates (TAIR10)

chr2:-:14114569..14115757

Molecular Weight (calculated)

26643.70 Da

IEP (calculated)

10.03

GRAVY (calculated)

-0.61

Length

246 amino acids

Sequence (TAIR10)
(BLAST)

001: MITELEMGKG ESELELGLGL SLGGGTAAKI GKSGGGGAWG ERGRLLTAKD FPSVGSKRAA DSASHAGSSP PRSSQVVGWP PIGSHRMNSL VNNQATKSAR
101: EEEEAGKKKV KDDEPKDVTK KVNGKVQVGF IKVNMDGVAI GRKVDLNAHS SYENLAQTLE DMFFRTNPGT VGLTSQFTKP LRLLDGSSEF VLTYEDKEGD
201: WMLVGDVPWR MFINSVKRLR VMKTSEANGL AARNQEPNER QRKQPV