AT2G02180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : tobamovirus multiplication protein 3 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Necessary for the efficient multiplication of tobamoviruses. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
tobamovirus multiplication protein 3 (TOM3); INVOLVED IN: viral replication complex formation and maintenance; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1084) (TAIR:AT1G14530.2); Has 262 Blast hits to 261 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 62 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:560976..562961 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34990.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.75 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.61 | ||||||||||||||||||||||||||||||||||||||||
| Length | 303 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRIGGVEVTK FASEMMSSSS SSAVEMLNLK EASNWWSDVN ESPIWQDRIF HVLAVLYGIV SLVAVIQLVR IQLRVPEYGW TTQKVFHFLN FVVNGVRAVV 101: FVFRRNVQFM QPEILQHILL DIPSLAFFTT YALLVLFWAE IYYQARAVST DGLRPSFFTI NAVVYVVQIA LWLVLWWKPV RVMVILSKMF FAGVSLFAAL 201: GFLLYGGRLF LMLQRFPVES KGRRKKLQEV GYVTTICFTC FLIRCIMMCF AAFDEGANLD VLDHPILNFI YYLLVEILPS SLVLFILRKL PPKRGITQYH 301: QIR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)