AT1G52420.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:golgi 0.803 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : UDP-Glycosyltransferase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT3G15940.2); Has 7088 Blast hits to 7079 proteins in 1470 species: Archae - 243; Bacteria - 4881; Metazoa - 13; Fungi - 38; Plants - 140; Viruses - 0; Other Eukaryotes - 1773 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:19528667..19531035 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75640.80 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 10.60 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.43 | ||||||||||||||||||||||||||||||||||||
| Length | 670 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEIRLSPLR QTSVKSSLSG RSTPRGTPRV YSGRTPRRGH GGGGAFQWFR SSRLVYWLLL ITLWTYLGFY VQSRWAHDNE SKVEFLRFGG RPRKDELYME 101: KIKGLDVVAN ENSEALVNIT GKDDAGSNKR TDVSLIKKDD GVSRRSLSSK QKTRKTVRTS RSKIRVKQKV IKEVLETKDL DDEQDPQLPL TNATYGKLLG 201: PFGSLEDKVL EWSPHRRSGT CDRKSDFKRL VWSRRFVLLF HELSMTGAPI SMMELASELL SCGATVSAVV LSRRGGLMQE LSRRRIKVVE DKGELSFKTA 301: MKADLIIAGS AVCTSWIDQY MNHHPAGGSQ IAWWIMENRR EYFDRAKPVL DRVKMLIFLS ESQSRQWLTW CEEEHIKLRS QPVIVPLSVN DELAFVAGIP 401: SSLNTPTLSP EKMRVKRQIL RESVRTELGI TDSDMLVMSL SSINPTKGQL LLLESIALAL SERGQESQRN HKGIIRKEKV SLSSKHRLRG SSRQMKSVSL 501: TLDNGLRREK QELKVLLGSV GSKSNKVGYV KEMLSFLSNS GNLSKSVMWT PATTRVASLY SAADVYVTNS QGVGETFGRV TIEAMAYGLA VVGTDAGGTK 601: EMVQHNMTGL LHSMGRSGNK ELAHNLLYLL RNPDERLRLG SEGRKMVEKM YMKQHMYKRF VDVLVKCMRP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)