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AT1G17500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G72700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G17500-MONOMERBioGrid:23564EC:3.6.3.1eggNOG:ENOG410ITKD
eggNOG:ENOG410XPYKEMBL:AC022492EMBL:CP002684EnsemblPlants:AT1G17500
EnsemblPlants:AT1G17500.1entrez:838324Gene3D:2.70.150.10Gene3D:3.40.1110.10
Gene3D:3.40.50.1000GeneID:838324Genevisible:Q9LNQ4GO:GO:0000287
GO:GO:0004012GO:GO:0005524GO:GO:0005886GO:GO:0016021
Gramene:AT1G17500.1hmmpanther:PTHR24092hmmpanther:PTHR24092:SF55HOGENOM:HOG000202528
InParanoid:Q9LNQ4InterPro:IPR001757InterPro:IPR006539InterPro:IPR008250
InterPro:IPR018303InterPro:IPR023214InterPro:IPR023299InterPro:IPR032630
InterPro:IPR032631iPTMnet:Q9LNQ4KEGG:ath:AT1G17500KO:K01530
OMA:MPKWWYLPANTHER:PTHR24092PaxDb:Q9LNQ4Pfam:PF12710
Pfam:PF16209Pfam:PF16212Pfam:Q9LNQ4PhylomeDB:Q9LNQ4
PRIDE:Q9LNQ4PRO:PR:Q9LNQ4PROSITE:PS00154ProteinModelPortal:Q9LNQ4
Proteomes:UP000006548Reactome:R-ATH-936837RefSeq:NP_173193.2scanprosite:PS00154
STRING:3702.AT1G17500.1SUPFAM:0049471SUPFAM:0049473SUPFAM:SSF56784
SUPFAM:SSF81660SwissPalm:Q9LNQ4TAIR:AT1G17500TIGRfam:TIGR01494
TIGRfam:TIGR01652TIGRFAMs:TIGR01494TIGRFAMs:TIGR01652TMHMM:TMhelix
UniGene:At.27975UniProt:Q9LNQ4
Coordinates (TAIR10) chr1:+:6018757..6023201
Molecular Weight (calculated) 138197.00 Da
IEP (calculated) 7.66
GRAVY (calculated) -0.06
Length 1216 amino acids
Sequence (TAIR10)
(BLAST)
0001: MARGRIRSKL RLSHIYTFGC LRPSADEGQD PHPIQGPGFS RTVYCNQPHM HKKKPLKYRS NYVSTTRYNL ITFFPKCLYE QFHRAANFYF LVAAILSVFP
0101: LSPFNKWSMI APLVFVVGLS MLKEALEDWS RFMQDVKINA SKVYVHKSDG EFRRRKWKKI SVGDIVKVEK DGFFPADLLL LSSSYEDGIC YVETMNLDGE
0201: TNLKVKRSLE VTLSLDDYDS FKDFTGIIRC EDPNPSLYTF VGNLEYERQI FPLDPSQILL RDSKLRNTPY VYGVVVFTGH DTKVMQNSTK SPSKRSRIEK
0301: TMDYIIYTLL VLLILISCIS SSGFAWETKF HMPKWWYLRP EEPENLTNPS NPVYAGFVHL ITALLLYGYL IPISLYVSIE VVKVLQASFI NKDLHMYDSE
0401: SGVPAHARTS NLNEELGQVD TILSDKTGTL TCNQMDFLKC SIAGTSYGVR SSEVEVAAAQ QMAVDLDEHG EVSSRTSTPR AQARDIEVES SITPRIPIKG
0501: FGFEDIRLMD GNWLREPHTD DILLFFRILA ICHTAIPELN EETGKYTYEA ESPDEASFLT AASEFGFVFF KRTQSSVYVH ERLSHSGQTI EREYKVLNLL
0601: DFTSKRKRMS VVVRDEEGQI LLLCKGADSI IFERLAKNGK VYLGPTTKHL NEYGEAGLRT LALSYRKLDE EEYSAWNAEF HKAKTSIGSD RDELLERISD
0701: MIEKDLILVG ATAVEDKLQK GVPQCIDKLA QAGLKLWVLT GDKMETAINI GYSCSLLRQG MKQICITVVN SEGASQDAKA VKDNILNQIT KAVQMVKLEK
0801: DPHAAFALII DGKTLTYALE DEMKYQFLAL AVDCASVICC RVSPKQKALV TRLVKEGTGK ITLAIGDGAN DVGMIQEADI GVGISGVEGM QAVMASDFSI
0901: AQFRFLERLL VVHGHWCYKR IAQMICYFFY KNIAFGLTLF YFEAFTGFSG QSVYNDYYLL LFNVVLTSLP VIALGVFEQD VSSEICLQFP ALYQQGKKNL
1001: FFDWYRILGW MGNGVYSSLV IFFLNIGIIY EQAFRVSGQT ADMDAVGTTM FTCIIWAVNV QIALTVSHFT WIQHVLIWGS IGLWYLFVAL YGMMPPSLSG
1101: NIYRILVEIL APAPIYWIAT FLVTVTTVLP YFAHISFQRF LHPLDHHIIQ EIKYYKRDVE DRRMWTRERT KAREKTKIGF TARVDAKIRH LRSKLNKKQS
1201: NMSQFSTQDT MSPRSV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)