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AT1G72700.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 0.446
plasma membrane 0.272
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G17500.1); Has 13795 Blast hits to 12389 proteins in 1682 species: Archae - 129; Bacteria - 4365; Metazoa - 3646; Fungi - 2158; Plants - 963; Viruses - 3; Other Eukaryotes - 2531 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G72700-MONOMERBioGrid:28821EC:3.6.3.1eggNOG:ENOG410ITKD
eggNOG:ENOG410XPYKEMBL:AC010926EMBL:CP002684EnsemblPlants:AT1G72700
EnsemblPlants:AT1G72700.1entrez:843602Gene3D:2.70.150.10Gene3D:3.40.1110.10
Gene3D:3.40.50.1000GeneID:843602Genevisible:Q9SGG3GO:GO:0000287
GO:GO:0004012GO:GO:0005524GO:GO:0016021Gramene:AT1G72700.1
hmmpanther:PTHR24092hmmpanther:PTHR24092:SF55HOGENOM:HOG000202528InParanoid:Q9SGG3
InterPro:IPR001757InterPro:IPR006539InterPro:IPR008250InterPro:IPR018303
InterPro:IPR023214InterPro:IPR023299InterPro:IPR032630InterPro:IPR032631
iPTMnet:Q9SGG3KEGG:ath:AT1G72700KO:K01530OMA:NDILQFF
PANTHER:PTHR24092PaxDb:Q9SGG3Pfam:PF12710Pfam:PF16209
Pfam:PF16212Pfam:Q9SGG3PhylomeDB:Q9SGG3PIR:G96751
PRIDE:Q9SGG3PRO:PR:Q9SGG3PROSITE:PS00154ProteinModelPortal:Q9SGG3
Proteomes:UP000006548Reactome:R-ATH-936837RefSeq:NP_177414.1scanprosite:PS00154
SMR:Q9SGG3STRING:3702.AT1G72700.1SUPFAM:0049471SUPFAM:0049473
SUPFAM:SSF56784SUPFAM:SSF81660TAIR:AT1G72700TIGRfam:TIGR01494
TIGRfam:TIGR01652TIGRFAMs:TIGR01494TIGRFAMs:TIGR01652TMHMM:TMhelix
UniGene:At.35067UniProt:Q9SGG3
Coordinates (TAIR10) chr1:+:27366910..27371491
Molecular Weight (calculated) 139349.00 Da
IEP (calculated) 7.25
GRAVY (calculated) -0.07
Length 1228 amino acids
Sequence (TAIR10)
(BLAST)
0001: MARGRIRSKL RLSLLYTFGC LRPATLEGQD SQPIQGPGFS RTVFCNQPHM HKKKPLRYRS NYVSTTRYNL ITFFPKSLYE QFHRAANLYF LVAAILSVFP
0101: LSPFNKWSMI APLVFVVGLS MLKEALEDWR RFMQDVKINA RKTCVHKSDG VFRQRKWKKV SVGDIVKVEK DEFFPADLLL LSSSYEDGIC YVETMNLDGE
0201: TNLKVKRSLE VSLPLDDDES FKNFMATIRC EDPNPNLYTF VGNLEFERQT FPLDPSQILL RDSKLRNTTY VYGVVVFTGF DTKVMQNSTK SPSKRSRIER
0301: TMDYIIYTLL VLLILISCIS SSGFAWETEF HMPKMWYLRP GEPIDFTNPI NPIYAGVVHL ITALLLYGYL IPISLYVSIE VVKVWQASFI NQDLHMYDDE
0401: SGVPANARTS NLNEELGQVH TILSDKTGTL TCNQMDFLKC SIAGTSYGVR SSEVEVAAAK QMAVDLEEHG EISSTPQSQT KVYGTWDSSR TQEIEVEGDN
0501: NYNTPRAPIK GFGFEDNRLM NGNWLRESQP NDILQFFRIL AICHTAIPEL NEETGKYTYE AESPDEASFL AAAREFGFEF FKRTQSSVFI RERFSGSGQI
0601: IEREYKVLNL LEFTSKRKRM TVIVRDEEGQ ILLLCKGADS IIFERLAKNG KTYLGPTTRH LTEYGEAGLR TLALAYRKLD EDEYAAWNSE FLKAKTSIGS
0701: DRDELLETGA DMIEKELILI GATAVEDKLQ KGVPQCIDKL AQAGLKLWVL TGDKMETAIN IGFACSLLRQ GMRQICITSM NSEGGSQDSK RVVKENILNQ
0801: LTKAVQMVKL EKDPHAAFAL IIDGKTLTYA LEDDMKYQFL ALAVDCASVI CCRVSPKQKA LVVRLVKEGT GKTTLAIGDG ANDVGMIQEA DIGVGISGVE
0901: GMQAVMASDF SIAQFRFLER LLVVHGHWCY KRIAQMICYF FYKNIAFGLT LFYFEAFTGF SGQSVYNDYY LLLFNVVLTS LPVIALGVFE QDVSSEICLQ
1001: FPALYQQGTK NLFFDWSRIL GWMCNGVYAS LVIFFLNIGI IYSQAFRDNG QTADMDAVGT TMFTCIIWAA NVQIALTMSH FTWIQHVLIW GSIGMWYLFV
1101: AIYSMMPPSY SGNIYRILDE ILAPAPIYWM ATLLVTVAAV LPYVAHIAFQ RFLNPLDHHI IQEIKYYGRD IEDARLWTRE RTKAREKTKI GFTARVDAKI
1201: RHLRSKLNKK QSNLSHFSAQ DAMSPRSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)