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AT1G32120.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.519
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGRXeggNOG:ENOG4111H32EMBL:AC084165EMBL:CP002684
EnsemblPlants:AT1G32120EnsemblPlants:AT1G32120.1entrez:840104GeneID:840104
GO:GO:0016020GO:GO:0016021Gramene:AT1G32120.1hmmpanther:PTHR16007
hmmpanther:PTHR16007:SF15InterPro:IPR006904InterPro:IPR019557KEGG:ath:AT1G32120
ncoils:CoilOMA:ETPELAWPANTHER:PTHR16007Pfam:PF04819
Pfam:PF10536PIR:E86445Proteomes:UP000006548RefSeq:NP_174491.1
TAIR:AT1G32120TMHMM:TMhelixUniGene:At.40210UniProt:Q9FVQ7
Coordinates (TAIR10) chr1:+:11552926..11558608
Molecular Weight (calculated) 134163.00 Da
IEP (calculated) 9.77
GRAVY (calculated) -0.37
Length 1206 amino acids
Sequence (TAIR10)
(BLAST)
0001: MEESRGSSDQ EDEQIVQVRE ALMCPDGEKF ESLRTARFLN YTTASIDDDV FDLPLDAFVC RPPEGFDPTA KISFPGWGTP SLNWIEWVNV MAKSHATVWK
0101: KSGVYDAILA SRYQIKRHDD LIVALVEKWC IETNTFVFPW GEATLTLEDM IVLGGLSVTG NNALAPVKRD GMKEVEEKMK EAKRYIEVSL EKKCCVSMWM
0201: KEMMNSGNEI EHEAFMVSWL SRFVFTNSGD VLREKLFPAA VQLAKGVRLA LAPAVLARIY GDLGVLKEFL TGYSEKETVV VKSPFQFVQV WALERFMALQ
0301: PPGQPSQLKT GEPRIARWHH YGGGQDVYGY PENIRAVLDS AKESFDYRPY TKPVNNFRFP KFYFEDDCWV RVRPDENIVA FGRCLRFAKL VGLDCIEPYY
0401: PHRVALQFGY DQDVPGVVPA RIETPELAWK DYIRPIADGM LYFPARLHEA DVTVGYIRWW KLSVAVLQLG AEKIFKTLLA SHSKQKPVTT TTTAATTPTK
0501: VTKKISAAKA EGKDQEVVKK REIETKRETS VTGSSIEVSR ADGRSHGSSS YAGSLTGSEQ ATKHPFKKPE WVQRSSHRPK KSPDRSSDEP EWVETSSARS
0601: TKSPARSSDN LKWVQRSSPR STKSPDRSSG RAADDVKDLK GALRGSGGTK SQGHVTFQLP SSPGRSPSKT HTFSPKQSDS PVKKPNMLPR VADLAKQSSS
0701: SPWVPRHTSS VAHPPKQENY IKHHNSTSSR VSKESNRTPS VSSYPLKRKT SQRSPEAINS RGQKNPPSPR VSKEPYMSSS LSVSSSSTRK KPPRSHEAAN
0801: SRGYNHTPSL RASKEPYKSS SLSGSSSTRK KPPRSHEASS SRGYNHPPSP RVSKELNKTP SISGSPSATR NKSPRSSENV NSCGNSSSGG NSVVKRNTDT
0901: SIIVSKQESP IKTQLDISKA NKLLEEVVTL REQVGEDGIV RKMGSFKGHA LPGTLFLVVG VWHIWSSVVR YISNPSSFRV RVWHPVPGFN DRIKYLELYV
1001: VTIGSFIDLC IEFLYSTHLK FFVNGVLNPS HMNDFEHSGM LLMFFILGFI ALLSEKTRLL PLPQEALCLI AATAFTAECL LFFFHSTSHK GLEGYYHLLL
1101: VFLIGLCVIS SIAGAICPTS FPVDLCNGIA MTLQGLWFYQ TAFTLYGPMM PQGCSLKQNS VVCRSVDSEV SGEFLANFQL FSLVLAVLVC VVGSYVFAAS
1201: RFGVSR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)