AT1G26130.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 ASURE: plasma membrane What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism; INVOLVED IN: metabolic process, ATP biosynthetic process, phospholipid transport; LOCATED IN: plasma membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, phospholipid-translocating, flippase (InterPro:IPR006539), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein (TAIR:AT1G68710.1); Has 13123 Blast hits to 11750 proteins in 1668 species: Archae - 131; Bacteria - 4350; Metazoa - 3110; Fungi - 2069; Plants - 970; Viruses - 2; Other Eukaryotes - 2491 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:+:9033600..9038246 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 133801.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.15 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1184 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MATVSGRRRK RKIQLSKLFT LTGAKACFKP DHSKIGRSGF SRVVFCNQPD SPEAESRNYC DNYVRTTKYT LATFLPKSLF EQFRRVANFY FLVVGILSFT 0101: PLAPYTAVSA IVPLTFVILA TMFKEGVEDW RRKQQDIEVN NRKVRVHRGN GNFDLREWKT LRVGDILKVE KNEFFPADLV LLSSSYEDAV CYVETMNLDG 0201: ETNLKLKQGL EVTLSLREEL NFRDFEAFIK CEDPNANLYS FVGTMDLKGE KYPLSPQQLL LRGSKLRNTD YIYGVVIFTG PDTKVVQNST DPPSKRSMIE 0301: RKMDKIIYLM FLMVFSLAFF GSVLFGIWTR DDFQNGVMER WYLKPDDSSI FFDPKRAPMA AIYHFLTALM LNSYFIPISL YVSIEIVKVL QSIFINQDIH 0401: MYYEEADKPA HARTSNLNEE LGQVGTILSD KTGTLTCNSM EFIKCSIAGT AYGRGVTEVE MAMDKRKGSA LVNQSNGNST EDAVAAEPAV KGFNFRDERI 0501: MDGNWVTETH ADVIQKFFQL LAVCHTVIPE VDEDTGKISY EAESPDEAAF VIAARELGFE FFTRTQTTIS VRELDLVTGE RVERLYSVLN VLEFSSSKKR 0601: MSVIVQDQDG KLLLLCKGAD SVMFERLSES GRKYEKETRD HVNEYADAGL RTLILAYREL DENEYEVFTE RISEAKNSVS ADREALIDEV TEKIEKNLVL 0701: LGATAVEDKL QNGVPDCINK LAQAGIKIWV LTGDKMETAI NIGFACSLLR RDMKQIIINL ETPEIQQLEK SGEKDAIAAL KENVLHQITS GKAQLKASGG 0801: NAKAFALIID GKSLAYALEE DMKGIFLELA IGCASVICCR SSPKQKALVT RLVKTGSGQT TLAIGDGAND VGMLQEADIG VGISGVEGMQ AVMSSDIAIA 0901: QFRYLERLLL VHGHWCYRRI SKMICYFFYK NITFGFTLFL YEAYTSFSAT PAYNDWYLSL YSVFFTSLPV ICLGIFDQDV SAPFCLKFPV LYQEGVQNLL 1001: FSWRRILSWM FHGFCSAIII FFLCKTSLES QAFNHEGKTA GRDILGGTMY TCVVWVVSLQ MVLTISYFTL IQHVVVWGSV VIWYLFLMVY GSLPIRMSTD 1101: AYMVFLEALA PAPSYWITTL FVVLSTMMPY FIFSAIQMRF FPMSHGTVQL LRYEDQCSNS GNFEMGRQGS VRPTLVMRSH QPES |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)