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AT1G22160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
nucleus 0.924
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein of unknown function (DUF581)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF581); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF581 (InterPro:IPR007650); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF581) (TAIR:AT1G78020.1); Has 511 Blast hits to 511 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 511; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J1QGeggNOG:ENOG410Y1Y5EMBL:AY072370EMBL:AY086318EMBL:AY114615EMBL:CP002684EnsemblPlants:AT1G22160
EnsemblPlants:AT1G22160.1entrez:838821GeneID:838821Gramene:AT1G22160.1hmmpanther:PTHR33059hmmpanther:PTHR33059:SF4HOGENOM:HOG000241756
IntAct:Q8VY80InterPro:IPR007650KEGG:ath:AT1G22160OMA:NQPSEQEPfam:PF04570PhylomeDB:Q8VY80Proteomes:UP000006548
RefSeq:NP_564160.1STRING:3702.AT1G22160.1TAIR:AT1G22160UniGene:At.21363UniProt:Q8VY80
Coordinates (TAIR10) chr1:+:7823238..7823774
Molecular Weight (calculated) 16965.30 Da
IEP (calculated) 10.15
GRAVY (calculated) -0.77
Length 147 amino acids
Sequence (TAIR10)
(BLAST)
001: MLLGKRQRPP IKRTTSLSEI KFDLNQPSEQ EPSDHQIQLV NVDEHRQVHQ RLLDQRLLAM VSPRGTQRRH SSDYSEDFLR SCSLCKRLLV HGRDIYMYRG
101: DRAFCSLECR QQQITVDERK EKKKGSVRST IVVATGTTTG ERVSAAV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)