AT1G68600.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.929 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Aluminium activated malate transporter family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Aluminium activated malate transporter family protein; INVOLVED IN: response to aluminum ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Malate transporter, aliminium toerance (InterPro:IPR020966); BEST Arabidopsis thaliana protein match is: Aluminium activated malate transporter family protein (TAIR:AT1G25480.1); Has 818 Blast hits to 814 proteins in 251 species: Archae - 0; Bacteria - 420; Metazoa - 0; Fungi - 36; Plants - 336; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:25759947..25762778 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 60225.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.43 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.03 | ||||||||||||||||||||||||||||||||||||||||
| Length | 537 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGGKMGSVPE QNTEKLLWQS SDVADSRDSK FRCCSWRALY EAPAKLYALG HSDRRKLYFS IKMGIALALC SFVIFLKEPL QDASKFAVWA ILTVVLIFEY 101: YVGATLVKGF NRALGTMLAG GLALGVAQLS VLAGEFEEVI IVICIFLAGF GASYLKLYAS MKPYEYAFRV FKLTYCIVLV SGNNSRDFLS TAYYRILLIG 201: LGATICLLVN VFLFPIWAGE DLHKLVAKNF KNVANSLEGC VNGYLQCVEY ERIPSKILTY QASDDPLYSG YRSAVQSTSQ EDSLLDFAIW EPPHGPYKTF 301: NHPWKNYVKL SGAVRHCAFT VMAMHGCILS EIQASPEKRH VFSNELRRVG NEGAKVLRLF GEKVEKMEKL SLSLGEILKD VQRAAEALQM KIDSKSYLLV 401: NSESWAAIKE QAEAEEAREN DQEAKDDETK VIKSLSQIWD TNNNNNHQSN DQSQHWMSTE SMMLKNREMW PSMSFIDGTV VNEIECKVYE SASSLSLATF 501: ASLLIEFVAR LQNIVNAFEE LSTKAGFKDA VDQIPKV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)