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AT5G52320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.512
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cytochrome P450, family 96, subfamily A, polypeptide 4
Curator
Summary (TAIR10)
member of CYP96A
Computational
Description (TAIR10)
cytochrome P450, family 96, subfamily A, polypeptide 4 (CYP96A4); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 3 (TAIR:AT1G65340.1); Has 28681 Blast hits to 28604 proteins in 1474 species: Archae - 45; Bacteria - 2612; Metazoa - 10653; Fungi - 6357; Plants - 7925; Viruses - 3; Other Eukaryotes - 1086 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1895-MONOMEReggNOG:COG2124eggNOG:KOG0157EMBL:AB019226
EMBL:CP002688EnsemblPlants:AT5G52320EnsemblPlants:AT5G52320.1entrez:835308
Gene3D:1.10.630.10GeneID:835308GO:GO:0004497GO:GO:0005506
GO:GO:0016021GO:GO:0016705GO:GO:0020037Gramene:AT5G52320.1
hmmpanther:PTHR24296hmmpanther:PTHR24296:SF1InterPro:IPR001128InterPro:IPR002401
InterPro:IPR017972KEGG:ath:AT5G52320KO:K00517OMA:YMTIDTT
Pfam:PF00067PhylomeDB:Q9FHC8PRINTS:PR00385PRINTS:PR00463
PROSITE:PS00086Proteomes:UP000006548RefSeq:NP_200045.1scanprosite:PS00086
SMR:Q9FHC8STRING:3702.AT5G52320.1SUPFAM:SSF48264TAIR:AT5G52320
tair10-symbols:CYP96A4TMHMM:TMhelixUniGene:At.29623UniProt:Q9FHC8
Coordinates (TAIR10) chr5:-:21245111..21246619
Molecular Weight (calculated) 57288.00 Da
IEP (calculated) 9.10
GRAVY (calculated) -0.06
Length 502 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMIIGLLEI FIAFIFFFVY QCFSLHKKTP KHMVMNWPVL GMLPGVLFQI PRIYDFVTEA LEAENMTGCF IGPWLSGTDI LLTVDPVNIQ YILSSNFVNY
101: PKGKKFNKIF EFLGDGIFNV DSGLWEDMRN SSHAIFSHQD FQSFSVSTSV SKLSQGLVPI LDNAVEKHIL VDLQDLFQRF LFDTSSTLMA GYDPKSLSVE
201: MPKVEFADAM DGVADAMFYR HLKPAFLWSI QSWIGVGIEK KMRRGLDVFD QMLGKIISAK REEIKNHGIH DSKGEAMDVL TYYMTIDTTK YKHLKPSNDK
301: FIRDTILGLV IAARDTTSSA LTWFFWLLSK NPEAMTKIRQ EINKKMPKFD PADLDKLVYL DGAVCETLRL YPSVPFNHKS PAKPDVLPSG HKVDKNWRVV
401: IPIYSLGRMK SVWGDDAEDF RPERWISDSG MLRQESSYKF LAFNAGPRTC LGKRLTFLQM KTVAVEIIRN YDIKVVEGHK PKPVPSVLLR MQHGLKVSVT
501: KI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)