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AT1G14020.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
golgi 0.548
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-fucosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G03280.1); Has 821 Blast hits to 817 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 821; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVA3eggNOG:ENOG410YG3VEMBL:AK229836EMBL:AK229994EMBL:BT010612EMBL:CP002684EnsemblPlants:AT1G14020
EnsemblPlants:AT1G14020.1entrez:837963GeneID:837963GO:GO:0016757Gramene:AT1G14020.1hmmpanther:PTHR31741hmmpanther:PTHR31741:SF3
InterPro:IPR019378InterPro:IPR024709KEGG:00514+2.4.1.221KEGG:ath:AT1G14020OMA:KYSVIHFPfam:PF10250PhylomeDB:Q6NQ51
PIRSF:PIRSF009360Proteomes:UP000006548RefSeq:NP_172855.2STRING:3702.AT1G14020.1TAIR:AT1G14020UniGene:At.41996UniGene:At.41997
unipathway:UPA00378UniProt:Q6NQ51
Coordinates (TAIR10) chr1:+:4802930..4805111
Molecular Weight (calculated) 57573.70 Da
IEP (calculated) 8.82
GRAVY (calculated) -0.31
Length 499 amino acids
Sequence (TAIR10)
(BLAST)
001: MEVRSESNIT QARSDKLPLP PAVPKPRVQV WFVRVCSSIL VWTCLVQLFA AGELWHSRIF TGLTNQISRF SAPVEPVPLP PPLPPPRNYT SNGILLVSCN
101: GGLNQMRSAI CDMVTVARLL NLTLVVPELD KTSFWADPSG FEDIFDVRHF IDSLRDEVRI LRRLPKRFSR KYGYQMFEMP PVSWSDEKYY LKQVLPLFSK
201: HKVVHFNRTD TRLANNGLPL SLQWLRCRVN FQGLKFTPQL EALGSKLVRI LQQRGPFVAL HLRYEMDMLA FSGCTHGCTE EEAEELKKMR YTYPWWREKE
301: IVSEERRAQG LCPLTPEEVA LVLKALGFEK NTQIYIAAGE IYGSEHRLSV LREAFPRIVK KEMLLESAEL QQFQNHSSQM AALDFMVSVA SNTFIPTYDG
401: NMAKVVEGHR RYLGYKKTIL LDRKRLVELL DLHHNKTLTW DQFAVAVKEA HERRAGAPTH RRVISDKPKE EDYFYANPQE CLCEGTNCHD LFGHRNLTH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)