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AT2G17800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Arabidopsis RAC-like 1
Curator
Summary (TAIR10)
A member of ROP GTPase family. Rac-like GTP-binding protein ARAC1/ATGP2. Encodes a geranylgeranylated GTP binding protein. Involved in the auxin-activated 26S proteasome-dependent Aux/IAA proteolysis pathway.
Computational
Description (TAIR10)
Arabidopsis RAC-like 1 (ARAC1); FUNCTIONS IN: GTP binding; INVOLVED IN: auxin mediated signaling pathway, abscisic acid mediated signaling pathway; LOCATED IN: nucleus, cytoplasm, phragmoplast, spindle; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ras GTPase (InterPro:IPR001806), Small GTP-binding protein (InterPro:IPR005225), Ras (InterPro:IPR013753), Small GTPase, Rho type (InterPro:IPR003578); BEST Arabidopsis thaliana protein match is: RAC-like 6 (TAIR:AT4G35950.1); Has 24212 Blast hits to 24183 proteins in 668 species: Archae - 9; Bacteria - 59; Metazoa - 12648; Fungi - 3488; Plants - 2694; Viruses - 20; Other Eukaryotes - 5294 (source: NCBI BLink).
Protein Annotations
BioGrid:1647DIP:DIP-29819NeggNOG:COG1100eggNOG:KOG0393
EMBL:AF115466EMBL:AY093046EMBL:BT000393EMBL:CP002685
EMBL:U41295EMBL:U64919EnsemblPlants:AT2G17800EnsemblPlants:AT2G17800.1
EnsemblPlants:AT2G17800.2entrez:816290Gene3D:3.40.50.300GeneID:816290
Genevisible:Q38902GO:GO:0005525GO:GO:0005634GO:GO:0005737
GO:GO:0005819GO:GO:0005886GO:GO:0007264GO:GO:0009524
GO:GO:0009734GO:GO:0009738Gramene:AT2G17800.1Gramene:AT2G17800.2
hmmpanther:PTHR24072hmmpanther:PTHR24072:SF179HOGENOM:HOG000233974InParanoid:Q38902
InterPro:IPR001806InterPro:IPR005225InterPro:IPR027417KEGG:ath:AT2G17800
KO:K04392OMA:NPIIYPQPaxDb:Q38902Pfam:PF00071
Pfam:Q38902Pfscan:PS51420PhylomeDB:Q38902PIR:T08857
PRIDE:Q38902PRO:PR:Q38902PROSITE:PS51420ProteinModelPortal:Q38902
Proteomes:UP000006548Reactome:R-ATH-194840Reactome:R-ATH-198203Reactome:R-ATH-392451
Reactome:R-ATH-5666185RefSeq:NP_001077910.1RefSeq:NP_179371.1SMR:Q38902
STRING:3702.AT2G17800.1SUPFAM:SSF52540TAIR:AT2G17800tair10-symbols:ARAC1
tair10-symbols:ATGP2tair10-symbols:ATRAC1tair10-symbols:ATROP3tair10-symbols:ROP3
TIGRfam:TIGR00231TIGRFAMs:TIGR00231UniGene:At.23460UniProt:Q38902
Coordinates (TAIR10) chr2:+:7740313..7741942
Molecular Weight (calculated) 21531.00 Da
IEP (calculated) 9.53
GRAVY (calculated) -0.07
Length 197 amino acids
Sequence (TAIR10)
(BLAST)
001: MSASRFIKCV TVGDGAVGKT CLLISYTSNT FPTDYVPTVF DNFSANVVVN GATVNLGLWD TAGQEDYNRL RPLSYRGADV FILAFSLISK ASYENVSKKW
101: IPELKHYAPG VPIVLVGTKL DLRDDKQFFI DHPGAVPITT AQGEELKKLI GAPAYIECSS KTQENVKGVF DAAIRVVLQP PKQKKKKSKA QKACSIL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)