AT1G10740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.988 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; INVOLVED IN: glycerol biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G23330.1); Has 782 Blast hits to 782 proteins in 229 species: Archae - 0; Bacteria - 631; Metazoa - 3; Fungi - 4; Plants - 47; Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:3568343..3570466 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53816.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.75 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.24 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 473 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIKLWMMTSL QLAELFVSSI VHLLYGFYIF SSAVAGDISQ TLNDYLFKSN VAFGETGQNQ TNVEGLPPIV LVHGIFGFGK GRLGGLSYFG GAEKKDERVL 101: VPDLGSLTSI YDRARELFYY LKGGVVDFGE EHSEACGHSR FGRRYEQGQY PEWDEDHPIH FVGHSAGAQV VRVLQQMLAD QAFEGFEETN ENWVLSVTSL 201: SGAFNGTTRT YLDGMRTDDG VSMKPICLLQ LCRIGVIMYD WLDISWLKTY YNFGFDHFNI SWKKTGVRGL VDCLMGNAGP FASGDWILPD LTIQGSTSIN 301: SNLQTFPNTY YFSYATKRTR RVMGMTIPSG VLGIHPMLFL RVFQMSQWKF PQDVSPPYKG YRDEDWQEND GALNTISMTH PRLPVEHPSR FIRSDSECQT 401: LQPGIWYYKI VEADHIMFIV NRERAGVQFD LIYDSIFQRC RKHVFRKIPQ TLPNQSPSSP RSSSSPRINN FVH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)