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AT1G12580.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : phosphoenolpyruvate carboxylase-related kinase 1
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
phosphoenolpyruvate carboxylase-related kinase 1 (PEPKR1); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: calcium-dependent protein kinase 34 (TAIR:AT5G19360.1); Has 122716 Blast hits to 120722 proteins in 3168 species: Archae - 154; Bacteria - 14954; Metazoa - 44101; Fungi - 12932; Plants - 28847; Viruses - 523; Other Eukaryotes - 21205 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G12580-MONOMEReggNOG:ENOG410XRMJeggNOG:KOG0032EMBL:AC025416
EMBL:AC025417EMBL:AY057692EMBL:AY143928EMBL:CP002684
EnsemblPlants:AT1G12580EnsemblPlants:AT1G12580.1entrez:837815GeneID:837815
GO:GO:0004674GO:GO:0004683GO:GO:0005516GO:GO:0005524
GO:GO:0005737GO:GO:0005886GO:GO:0009738GO:GO:0009931
GO:GO:0018105GO:GO:0035556GO:GO:0046777Gramene:AT1G12580.1
hmmpanther:PTHR24349hmmpanther:PTHR24349:SF111HOGENOM:HOG000077655InterPro:IPR000719
InterPro:IPR008271InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT1G12580
OMA:QDDMKSIPfam:PF00069Pfscan:PS50011PhylomeDB:Q9LDQ1
PIR:G86259PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011
Proteomes:UP000006548Reactome:R-ATH-2142691Reactome:R-ATH-3371453Reactome:R-ATH-450385
Reactome:R-ATH-5687128RefSeq:NP_172719.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9LDQ1STRING:3702.AT1G12580.1SUPFAM:SSF56112
TAIR:AT1G12580tair10-symbols:PEPKR1UniGene:At.26236UniProt:Q9LDQ1
Coordinates (TAIR10) chr1:+:4283635..4285675
Molecular Weight (calculated) 57464.00 Da
IEP (calculated) 5.27
GRAVY (calculated) -0.31
Length 522 amino acids
Sequence (TAIR10)
(BLAST)
001: MGMDIADKEN TSPLLFEFCN CYKVASLTET ILNPVNVSNL KDRYVLGEQL GWGQFGVIRV CSDKLTGERL ACKSISKDRL VTQDDMKSIK LEIAIMAKLA
101: GHPNVVNLKA VYEEKDSVHL VMELCAGGEL FHKLEKYGRY SEVRARVLFK HLMQVVKFCH DSGIVHRDLK PENILMATMS SSSPIKLADF GLATYIKPGE
201: KLSGTVGSPF YIAPEVLAGG YNQAADVWSA GVILYILLSG APPFWGKTKS KIFDAVRAAD LRFSAEPWDN ITSYAKDLIR GMLCVDPSQR LSADEVLAHS
301: WMEQLSESGQ EQYDQDGFGC EGLENGGCSF STQCVSREQD YSFSVGQLEQ STDNDFKSSF STFLPADNTL PNSGFDGFSF DGKQPESTTA GFSSTGIPSM
401: PSFTFFCTSP ARTQNNDITE IDGKVRDSSP KRLLPSPDSS SQLERRDEAG ENQTEAGGKS ETRRERGNWS RMSGLHSKRN RTIGLGELDQ LVVDVAVTES
501: IIRWASCTHI PTAPSLRLSL VC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)