suba logo
AT2G21120.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
plasma membrane 0.573
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Protein of unknown function (DUF803)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein of unknown function (DUF803); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF803) (TAIR:AT4G38730.1); Has 1321 Blast hits to 1303 proteins in 250 species: Archae - 0; Bacteria - 151; Metazoa - 424; Fungi - 360; Plants - 267; Viruses - 0; Other Eukaryotes - 119 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNR8eggNOG:KOG2922EMBL:AC006264EMBL:AK118581
EMBL:BT026119EMBL:CP002685EnsemblPlants:AT2G21120EnsemblPlants:AT2G21120.1
entrez:816647GeneID:816647Genevisible:Q8GWX2GO:GO:0005769
GO:GO:0005886GO:GO:0015095GO:GO:0015693GO:GO:0016021
Gramene:AT2G21120.1hmmpanther:PTHR12570hmmpanther:PTHR12570:SF11HOGENOM:HOG000203962
InParanoid:Q8GWX2InterPro:IPR008521KEGG:ath:AT2G21120OMA:IWTLATQ
PANTHER:PTHR12570PaxDb:Q8GWX2Pfam:PF05653Pfam:Q8GWX2
PhylomeDB:Q8GWX2PIR:D84597PRO:PR:Q8GWX2ProteinModelPortal:Q8GWX2
Proteomes:UP000006548RefSeq:NP_179708.2STRING:3702.AT2G21120.1SUPFAM:0043518
TAIR:AT2G21120TMHMM:TMhelixUniGene:At.45977UniProt:Q8GWX2
Coordinates (TAIR10) chr2:-:9052103..9054266
Molecular Weight (calculated) 35582.20 Da
IEP (calculated) 6.77
GRAVY (calculated) 0.65
Length 328 amino acids
Sequence (TAIR10)
(BLAST)
001: METDNGKGLI LAVASSVFIG SSFILKKKGL KRAGAIGTRA GYGGYTYLLE PLWWAGMVTM IVGEAANFVA YIYAPAVLVT PLGALSIIIS AVLAHFLLKE
101: KLKKMGVLGC VSCIVGSVVI VIHAPKEQTP NSVEEIWNLA TQPAFLIYVA ITMSIVLALI LHFEPLCGQT NILVYIGICS LMGALTVMSI KAIGIAIKLT
201: MEGVSQIGYP QTWLFVMVAV TCVVTQLIYL NKALDTFNAA IVSPVYYVMF TTLTIVASAI MFKDWSGQDA ASVASELCGF ITVLTGTMIL HGTREEEQQQ
301: ASSEHVRWYD SRKSMNEEHL VSLYSPEY
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)