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AT5G62760.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; Has 7376 Blast hits to 5164 proteins in 470 species: Archae - 2; Bacteria - 500; Metazoa - 3049; Fungi - 1087; Plants - 1477; Viruses - 399; Other Eukaryotes - 862 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410YIR5eggNOG:KOG2400EMBL:CP002688EnsemblPlants:AT5G62760
EnsemblPlants:AT5G62760.1entrez:836397ExpressionAtlas:F4K7T1Gene3D:3.40.50.300
GeneID:836397GO:GO:0005634GO:GO:0016787Gramene:AT5G62760.1
hmmpanther:PTHR13413hmmpanther:PTHR13413:SF0InParanoid:F4K7T1InterPro:IPR026314
InterPro:IPR027417OMA:FAQFWAIPANTHER:PTHR13413PaxDb:F4K7T1
PRIDE:F4K7T1ProteinModelPortal:F4K7T1Proteomes:UP000006548RefSeq:NP_851250.1
SMR:F4K7T1STRING:3702.AT5G62760.1SUPFAM:SSF52540TAIR:AT5G62760
UniGene:At.26632UniProt:F4K7T1
Coordinates (TAIR10) chr5:-:25204730..25209393
Molecular Weight (calculated) 74211.50 Da
IEP (calculated) 6.91
GRAVY (calculated) -0.82
Length 661 amino acids
Sequence (TAIR10)
(BLAST)
001: MDNNYQNYHH HHNHNHQQQW RPAPTQPNIC PICTVPHFPF CPPYPPPSSF AYNPNFPPPP HLNSPRPGFD SFTGPPVRPP QNHYPPWQPH HGNQWRPVAV
101: DVDREADRSY KRARIDTIAG GSPGYGVSES PSPRISWENE RRLKMVRDHG YGLAAPSNIE MNHQYGSEFR NGGQFNGVAP LPPPPPHHPP PYGGYFSGSN
201: GQPPLPVSPP PPLPSSHPSS LFPVTTNSSP TIPPSSSYPQ MPNASPSSAQ LAPTRSKVID VSHLLKPPHR STRPDHFVII LRGLPGSGKS YLAKLLRDVE
301: VENGGSAPRI HSMDDYFMTE VEKVEESDST SLSSGRSKRP IVKTVMEYCY EPEMEEAYRS SMLKAFKRTL EDGAFSFVIV CFLELTVSCW YMSLILVDDR
401: NLRVADFTQF WATAKRSGYE AYILEATYKD PTGCAARNVH GITVDQVQQM AEQWEEAPSL YMQLDIKSFT RWDDLKENEI QEVDMDMEDD FGLPERKSDN
501: STQSEEKGAT EGSYKSESKW DAESGSRTEE VKELSRSKWS NVEEDETENS QSMRRNSKSL PKSSQERQRK GKSVWWGDKG GDAGFSIGAA RNMNMPSLII
601: GPGSGYNVKS NPLSAEESRA LADAIGKAKV RGIFQDQLRA ERESFKAVFD KRHVRIVTKD K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)