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AT5G58320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.983
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Kinase interacting (KIP1-like) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Kinase interacting (KIP1-like) family protein; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: Kinase interacting (KIP1-like) family protein (TAIR:AT2G30500.2); Has 43389 Blast hits to 26086 proteins in 1835 species: Archae - 761; Bacteria - 5000; Metazoa - 21918; Fungi - 3966; Plants - 2572; Viruses - 157; Other Eukaryotes - 9015 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IENGeggNOG:ENOG410YMAJEMBL:AB019228EMBL:AK227698
EMBL:CP002688EnsemblPlants:AT5G58320EnsemblPlants:AT5G58320.1EnsemblPlants:AT5G58320.2
EnsemblPlants:AT5G58320.3entrez:835944ExpressionAtlas:F4KEW8GeneID:835944
GO:GO:0005774hmmpanther:PTHR32258hmmpanther:PTHR32258:SF4HOGENOM:HOG000237540
InParanoid:F4KEW8InterPro:IPR011684KEGG:ath:AT5G58320ncoils:Coil
OMA:DSHIGLKPaxDb:F4KEW8Pfam:PF07765Pfscan:PS51774
PRIDE:F4KEW8PRO:PR:F4KEW8PROSITE:PS51774ProteinModelPortal:F4KEW8
Proteomes:UP000006548RefSeq:NP_001032095.1RefSeq:NP_200640.2RefSeq:NP_851213.2
SMR:F4KEW8STRING:3702.AT5G58320.2SUPFAM:SSF57997TAIR:AT5G58320
UniGene:At.71066UniGene:At.9574UniProt:F4KEW9
Coordinates (TAIR10) chr5:+:23577728..23579641
Molecular Weight (calculated) 60124.90 Da
IEP (calculated) 4.95
GRAVY (calculated) -0.78
Length 525 amino acids
Sequence (TAIR10)
(BLAST)
001: MDYDLLRSKK SIKRVESTKS NPWWWDSHIG LKNSKWLENN LDEMDRSVKR MVKLIEEDAD SFAKKAEMYY QSRPELIALV DEFHRMYRAL AERYENITGE
101: LRKGSPLELQ SQGSGLSDIS ASDLSALWTS NEVNRLGRPP SGRRAPGFEY FLGNGGLPSD LYHKDGDDSA SITDSELESD DSSVTNYPGY VSIGSDFQSL
201: SKRIMDLEIE LREAKERLRM QLEGNTESLL PRVKSETKFV DFPAKLAACE QELKDVNEKL QNSEDQIYIL KSQLARYLPS GLDDEQSEGA ASTQELDIET
301: LSEELRITSL RLREAEKQNG IMRKEVEKSK SDDAKLKSLQ DMLESAQKEA AAWKSKASAD KREVVKLLDR ISMLKSSLAG RDHEIRDLKT ALSDAEEKIF
401: PEKAQVKADI AKLLEEKIHR DDQFKELEAN VRYLEDERRK VNNEKIEEEE KLKSEIEVLT LEKVEKGRCI ETLSRKVSEL ESEISRLGMI RQLCFSLDYS
501: RDEYKRLRIA FSGHPPTRPS SILAS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)